RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CLTAP09496 248 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 GRM5P41594 1212 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 POU5F1Q01860 360 aaKnown RBP15.4■□□□□ 0.06
SDC2-203ENST00000519587 UBXN11Q5T124 520 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 CEP135Q66GS9 1140 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 ZC3H3Q8IXZ2 948 aaKnown RBP15.4■□□□□ 0.06
SDC2-203ENST00000519587 THNSL1Q8IYQ7 743 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 DUSP9Q99956 384 aaKnown RBP15.4■□□□□ 0.06
SDC2-203ENST00000519587 FAM213AQ9BRX8 229 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
SDC2-203ENST00000519587 THAP9Q9H5L6 903 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 DMAC2Q9NW81 257 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 MAGEC2Q9UBF1 373 aaPredicted RBP15.4■□□□□ 0.06
SDC2-203ENST00000519587 NFE2L3Q9Y4A8 694 aa15.4■□□□□ 0.06
SDC2-203ENST00000519587 ZNF233A6NK53 670 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 GOLGA6L19H0YKK7 550 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 ZNF623O75123 536 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 AMHP03971 560 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 ITGA4P13612 1032 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 KRT13P13646 458 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 PSMC2P35998 433 aaKnown RBP15.39■□□□□ 0.05
SDC2-203ENST00000519587 KCNJ6P48051 423 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 SNRNP35Q16560 246 aaKnown RBP15.39■□□□□ 0.05
SDC2-203ENST00000519587 CCDC40Q4G0X9 1142 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 ANKRD20A12PQ8NF67 263 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 RSPH1Q8WYR4 309 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 ACAP3Q96P50 834 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 NXF3Q9H4D5 531 aaKnown RBP15.39■□□□□ 0.05
SDC2-203ENST00000519587 RPF1Q9H9Y2 349 aaKnown RBP15.39■□□□□ 0.05
SDC2-203ENST00000519587 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
SDC2-203ENST00000519587 UBN1Q9NPG3 1134 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 MTMR10Q9NXD2 777 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 LRFN2Q9ULH4 789 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 IPPQ9Y573 584 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 TTC3P53804 2025 aa15.39■□□□□ 0.05
SDC2-203ENST00000519587 ANK1P16157 1881 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 GOLGA8IPA6NC78 632 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 GOLGA8JA6NMD2 632 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 C9IYK1 514 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 HOXA2O43364 376 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 IL18RAPO95256 599 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 EOMESO95936 686 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 FGBP02675 491 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 STAG3L1P0CL83 205 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 ACRP10323 421 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 ACOT2P49753 483 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 PPP2R3AQ06190 1150 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 SPAG1Q07617 926 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 SURF1Q15526 300 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 INTS8Q75QN2 995 aaKnown RBP15.38■□□□□ 0.05
SDC2-203ENST00000519587 ECHDC2Q86YB7 292 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.38■□□□□ 0.05
SDC2-203ENST00000519587 RNF169Q8NCN4 708 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 LINC01599Q8WXQ3 324 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 SRRTQ9BXP5 876 aaKnown RBP15.38■□□□□ 0.05
SDC2-203ENST00000519587 HAPLN2Q9GZV7 340 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 ELAC1Q9H777 363 aaKnown RBP15.38■□□□□ 0.05
SDC2-203ENST00000519587 CBX8Q9HC52 389 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 TMEM161AQ9NX61 479 aa15.38■□□□□ 0.05
SDC2-203ENST00000519587 RBAKQ9NYW8 714 aaPredicted RBP15.38■□□□□ 0.05
SDC2-203ENST00000519587 PDCD11Q14690 1871 aaKnown RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 ENPP3O14638 875 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 FAM189A1O60320 539 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 RECQL4O94761 1208 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 TPM2P07951 284 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 IBSPP21815 317 aaPredicted RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 BMP8BP34820 402 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 OSTNP61366 133 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 ENPEPQ07075 957 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 GLB1LQ6UWU2 654 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 FILIP1Q7Z7B0 1213 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 MRPL10Q7Z7H8 261 aaKnown RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 CBWD2Q8IUF1 395 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 NPAS4Q8IUM7 802 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 BRSK2Q8IWQ3 736 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 CD302Q8IX05 232 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 SMG8Q8ND04 991 aaKnown RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 RPS6KC1Q96S38 1066 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 TSPAN18Q96SJ8 248 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 GDF15Q99988 308 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 APOL6Q9BWW8 343 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 PLEKHA5Q9HAU0 1116 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 PARP2Q9UGN5 583 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 ARMCX3Q9UH62 379 aaPredicted RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 CPSF3Q9UKF6 684 aaKnown RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 GIT1Q9Y2X7 761 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 PCDHB7Q9Y5E2 793 aa15.37■□□□□ 0.05
SDC2-203ENST00000519587 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.37■□□□□ 0.05
SDC2-203ENST00000519587 ZBBXA8MT70 800 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 AKAP3O75969 853 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 CXCL8P10145 99 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 EEF1GP26641 437 aaKnown RBP15.36■□□□□ 0.05
SDC2-203ENST00000519587 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
SDC2-203ENST00000519587 WDR5P61964 334 aaKnown RBP15.36■□□□□ 0.05
SDC2-203ENST00000519587 CYP24A1Q07973 514 aa15.36■□□□□ 0.05
SDC2-203ENST00000519587 ZNF365Q70YC5 407 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms