RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	EEF1DP3	Q658K8	133 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	KIAA1841	Q6NSI8	718 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	ANKRD54	Q6NXT1	300 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	KRI1	Q8N9T8	703 aa	Known RBP	26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	HERC2P3	Q9BVR0	1158 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	PARVG	Q9HBI0	331 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	FBXO2	Q9UK22	296 aa	Predicted RBP	26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	GDA	Q9Y2T3	454 aa		26.53	■■□□□ 1.84
CNOT7-204	ENST00000518885	DDIT3	P35638	169 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	CREM	Q03060	361 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	GRIN1	Q05586	938 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	DHX8	Q14562	1220 aa	Known RBP	26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	SLC39A14	Q15043	492 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	STK38	Q15208	465 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	PTPN14	Q15678	1187 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	MPZL3	Q6UWV2	235 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	ZPBP2	Q6X784	338 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	GSTCD	Q8NEC7	633 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	DPP7	Q9UHL4	492 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	HCFC2	Q9Y5Z7	792 aa		26.52	■■□□□ 1.84
CNOT7-204	ENST00000518885	TADA2A	O75478	443 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	TOM1L1	O75674	476 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	EDN1	P05305	212 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	GRM5	P41594	1212 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	GLUD2	P49448	558 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	ZP2	Q05996	745 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	HSP90AA2P	Q14568	343 aa	Predicted RBP	26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	ARSH	Q5FYA8	562 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	RRAGB	Q5VZM2	374 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	CES5A	Q6NT32	575 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	FAM173B	Q6P4H8	233 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	MYCT1	Q8N699	235 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	TMEM161B	Q8NDZ6	487 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	VN1R2	Q8NFZ6	395 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	REEP2	Q9BRK0	252 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	C1QTNF1	Q9BXJ1	281 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	BLOC1S4	Q9NUP1	217 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	MARCH5	Q9NX47	278 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	ADAM28	Q9UKQ2	775 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	USP20	Q9Y2K6	914 aa		26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	USP15	Q9Y4E8	981 aa	Predicted RBP	26.51	■■□□□ 1.83
CNOT7-204	ENST00000518885	NCOR1	O75376	2440 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	SF3B1	O75533	1304 aa	Known RBP eCLIP	26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	TDRD15	B5MCY1	1934 aa	Known RBP	26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	MAPT	P10636	758 aa	Known RBP	26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	KLRC2	P26717	231 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	NCKAP1L	P55160	1127 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	ITIH3	Q06033	890 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	MCM6	Q14566	821 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	CCDC73	Q6ZRK6	1079 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	GPR65	Q8IYL9	337 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	AUTS2	Q8WXX7	1259 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	BICD1	Q96G01	975 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	EPSTI1	Q96J88	318 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	UROC1	Q96N76	676 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	USP28	Q96RU2	1077 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	TARS2	Q9BW92	718 aa	Known RBP	26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	CDT1	Q9H211	546 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	PTPRH	Q9HD43	1115 aa		26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	26.5	■■□□□ 1.83
CNOT7-204	ENST00000518885	SPDYE4	A6NLX3	237 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	BRD1	O95696	1058 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	ADH1A	P07327	375 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	NASP	P49321	788 aa	Predicted RBP	26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	ELAVL2	Q12926	359 aa	Known RBP	26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	USP41	Q3LFD5	358 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	KCNN1	Q92952	543 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	VN1R3	Q9BXE9	311 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	ZHX3	Q9H4I2	956 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	SLC38A7	Q9NVC3	462 aa		26.49	■■□□□ 1.83
CNOT7-204	ENST00000518885	NPHP3-ACAD11	A0A0J9YXS1	232 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	PTGES	O14684	152 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	CLDN3	O15551	220 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	PROZ	P22891	400 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	MATR3	P43243	847 aa	Known RBP eCLIP	26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	ZNF131	P52739	623 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	CACNB1	Q02641	598 aa	Predicted RBP	26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	NOLC1	Q14978	699 aa	Known RBP eCLIP	26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	KYAT1	Q16773	422 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	FUT10	Q6P4F1	479 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	TAS1R3	Q7RTX0	852 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	HAUS6	Q7Z4H7	955 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	NECTIN4	Q96NY8	510 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	ACAP3	Q96P50	834 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	ANKFY1	Q9P2R3	1169 aa		26.48	■■□□□ 1.83
CNOT7-204	ENST00000518885	C19orf67	A6NJJ6	358 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885		K7ENM7	598 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	TRAK2	O60296	914 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	ZSCAN22	P10073	491 aa	Predicted RBP	26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	ALAD	P13716	330 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	RBM10	P98175	930 aa	Known RBP	26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	SPECC1	Q5M775	1068 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	SV2B	Q7L1I2	683 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	ZBTB33	Q86T24	672 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	RIPOR3	Q96MK2	946 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	KLHL5	Q96PQ7	755 aa		26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	PHF7	Q9BWX1	381 aa	Predicted RBP	26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	26.47	■■□□□ 1.83
CNOT7-204	ENST00000518885	C2CD2L	O14523	706 aa		26.46	■■□□□ 1.83
CNOT7-204	ENST00000518885	PPP6R2	O75170	966 aa		26.46	■■□□□ 1.83

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms