RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
AP3B1-203ENST00000517940 SPTBN5Q9NRC6 3674 aaKnown RBP12.92□□□□□ -0.34
AP3B1-203ENST00000517940 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
AP3B1-203ENST00000517940 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
AP3B1-203ENST00000517940 YBX2Q9Y2T7 364 aaKnown RBP12.92□□□□□ -0.34
AP3B1-203ENST00000517940 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 PDXKO00764 312 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 OGTO15294 1046 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 CLDN3O15551 220 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 UPP2O95045 317 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 AMHP03971 560 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 STAG3L1P0CL83 205 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 CXCL8P10145 99 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
AP3B1-203ENST00000517940 IBSPP21815 317 aaPredicted RBP12.91□□□□□ -0.34
AP3B1-203ENST00000517940 ABCD1P33897 745 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 ACOT2P49753 483 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 RAB27AP51159 221 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 OSTNP61366 133 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 NFIL3Q16649 462 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 ZSCAN23Q3MJ62 389 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 KLHL10Q6JEL2 608 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
AP3B1-203ENST00000517940 CBWD2Q8IUF1 395 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 THNSL1Q8IYQ7 743 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 SYCP3Q8IZU3 236 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
AP3B1-203ENST00000517940 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 POMGNT1Q8WZA1 660 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 P2RX5Q93086 422 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 SNX27Q96L92 541 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 HSPBP1Q9NZL4 362 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 KLK14Q9P0G3 267 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 AGO2Q9UKV8 859 aaKnown RBP12.91□□□□□ -0.34
AP3B1-203ENST00000517940 EXOC7Q9UPT5 735 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 CTNND2Q9UQB3 1225 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 SLC4A7Q9Y6M7 1214 aa12.91□□□□□ -0.34
AP3B1-203ENST00000517940 TTC26A0AVF1 554 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 SYCE3A1L190 88 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 EOMESO95936 686 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 NR3C1P04150 777 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 PTMSP20962 102 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 IGFBP6P24592 240 aaPredicted RBP12.9□□□□□ -0.34
AP3B1-203ENST00000517940 CCNE1P24864 410 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 MLH1P40692 756 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 KCNJ6P48051 423 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 STX17P56962 302 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 TYRO3Q06418 890 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 C1orf220Q5T0J3 134 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 STXBP4Q6ZWJ1 553 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 RNF169Q8NCN4 708 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 PHOSPHO2Q8TCD6 241 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 NELFBQ8WX92 580 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 CCDC47Q96A33 483 aaKnown RBP12.9□□□□□ -0.34
AP3B1-203ENST00000517940 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 GAD1Q99259 594 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 CACNG4Q9UBN1 327 aa12.9□□□□□ -0.34
AP3B1-203ENST00000517940 SOX1O00570 391 aaPredicted RBP12.89□□□□□ -0.35
AP3B1-203ENST00000517940 EXTL3O43909 919 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 AKAP3O75969 853 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 ITGA4P13612 1032 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 CYP2J2P51589 502 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 MCCD1P59942 119 aaPredicted RBP12.89□□□□□ -0.35
AP3B1-203ENST00000517940 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
AP3B1-203ENST00000517940 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 EDRF1Q3B7T1 1238 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 DHTKD1Q96HY7 919 aaPredicted RBP12.89□□□□□ -0.35
AP3B1-203ENST00000517940 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
AP3B1-203ENST00000517940 ADPGKQ9BRR6 497 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 TCHPQ9BT92 498 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 PBX4Q9BYU1 374 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 CWH43Q9H720 699 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 SCN1AP35498 2009 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
AP3B1-203ENST00000517940 PLXNA4Q9HCM2 1894 aa12.89□□□□□ -0.35
AP3B1-203ENST00000517940 LACTBL1A8MY62 500 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 DDHD2O94830 711 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 CLTAP09496 248 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 SKIP12755 728 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 SCNN1GP51170 649 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
AP3B1-203ENST00000517940 SPAG1Q07617 926 aa12.88□□□□□ -0.35
AP3B1-203ENST00000517940 DSC1Q08554 894 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms