RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 UBXN2BQ14CS0 331 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 CDR2LQ86X02 465 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 C4orf19Q8IY42 314 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 ZBTB44Q8NCP5 570 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 CLSTN3Q9BQT9 956 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 SLKQ9H2G2 1235 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 LTB4R2Q9NPC1 389 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 RGL1Q9NZL6 768 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 GIT1Q9Y2X7 761 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 PCDHGA2Q9Y5H1 932 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 VWA8A3KMH1 1905 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 FAM170BA6NMN3 283 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 CCL16O15467 120 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 ASAP2O43150 1006 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 C8AP07357 584 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 EVCP57679 992 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 CREMQ03060 361 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 GRIK3Q13003 919 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 CAPSQ13938 189 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 PCBP1Q15365 356 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 XKR9Q5GH70 373 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 ITFG1Q8TB96 612 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 ASAP3Q8TDY4 903 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 HASPINQ8TF76 798 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 TCP11Q8WWU5 503 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 NELL1Q92832 810 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 HAS1Q92839 578 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 MTRQ99707 1265 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 KXD1Q9BQD3 176 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
CTNNA1-205ENST00000517904 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 ADAM12O43184 909 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 LILRB5O75023 590 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 TADA2AO75478 443 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 HNRNPA1P09651 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 TGM1P22735 817 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 HSPA4P34932 840 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 CTTNQ14247 550 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 HSP90AA2PQ14568 343 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 MXD4Q14582 209 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 EPHA7Q15375 998 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 PPM1LQ5SGD2 360 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 LIN9Q5TKA1 542 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 TSSK4Q6SA08 328 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 MTSS1LQ765P7 747 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 ATRIPQ8WXE1 791 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 PIK3R5Q8WYR1 880 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 DYDC2Q96IM9 177 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 FAM20AQ96MK3 541 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 HCFC1R1Q9NWW0 138 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 ZSCAN32Q9NX65 697 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 SMG5Q9UPR3 1016 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 FRYQ5TBA9 3013 aa12.62□□□□□ -0.39
CTNNA1-205ENST00000517904 F5P12259 2224 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 SHISA7A6NL88 538 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 KIF4AO95239 1232 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 DEXIO95424 95 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 NPTXRO95502 500 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 HOXA9P31269 272 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 CYP4A11Q02928 519 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 POU5F1BQ06416 359 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 NCBP1Q09161 790 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 FZD5Q13467 585 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 PSMD5Q16401 504 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 NCAPH2Q6IBW4 605 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 SLC27A1Q6PCB7 646 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 POTEHQ6S545 545 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 OTUD6AQ7L8S5 288 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 KRT25Q7Z3Z0 450 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 CLDN23Q96B33 292 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 TTPALQ9BTX7 342 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 PHF20Q9BVI0 1012 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 ZSWIM4Q9H7M6 989 aa12.61□□□□□ -0.39
CTNNA1-205ENST00000517904 PARD6AQ9NPB6 346 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms