RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SIGLEC14Q08ET2 396 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 GLRA4Q5JXX5 417 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 TTC38Q5R3I4 469 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 NOTUMQ6P988 496 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 FAM43BQ6ZT52 329 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-202ENST00000517403 GPR149Q86SP6 731 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 ZNF710Q8N1W2 664 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 FBXL6Q8N531 539 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 KCTD17Q8N5Z5 321 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 FBXO18Q8NFZ0 1043 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 PBXIP1Q96AQ6 731 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 C8orf76Q96K31 380 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 RPS6KC1Q96S38 1066 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 MYADMQ96S97 322 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 TMEM175Q9BSA9 504 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 NFKBIZQ9BYH8 718 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 HAPLN2Q9GZV7 340 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 FZD8Q9H461 694 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 MAN1C1Q9NR34 630 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 CHST7Q9NS84 486 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 PUF60Q9UHX1 559 aaKnown RBP9.58□□□□□ -0.88
PABPC1-202ENST00000517403 LIMCH1Q9UPQ0 1083 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 PPME1Q9Y570 386 aa9.58□□□□□ -0.88
PABPC1-202ENST00000517403 ANK1P16157 1881 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 E9PMD0 336 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 GAS2O43903 313 aaKnown RBP9.57□□□□□ -0.88
PABPC1-202ENST00000517403 ERLIN2O94905 339 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 PAPLNO95428 1278 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 NEFLP07196 543 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 HOXB8P17481 243 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-202ENST00000517403 DSG1Q02413 1049 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 GRIN1Q05586 938 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 POU5F1BQ06416 359 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 FUT10Q6P4F1 479 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 LILRA6Q6PI73 481 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 PADI6Q6TGC4 694 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 TCP11Q8WWU5 503 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 WASF1Q92558 559 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 JPH2Q9BR39 696 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-202ENST00000517403 POLR3CQ9BUI4 534 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-202ENST00000517403 RXFP1Q9HBX9 757 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 TUFT1Q9NNX1 390 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 SNTG2Q9NY99 539 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 LIMD1Q9UGP4 676 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 DBR1Q9UK59 544 aaKnown RBP9.57□□□□□ -0.88
PABPC1-202ENST00000517403 FAN1Q9Y2M0 1017 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 VPS13AQ96RL7 3174 aa9.57□□□□□ -0.88
PABPC1-202ENST00000517403 NCANO14594 1321 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 I3L4J1 428 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 TGM5O43548 720 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 GALR2O43603 387 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 PRKCBP05771 671 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 SKIP12755 728 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 XBP1P17861 261 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 LIG1P18858 919 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 CYP11B2P19099 503 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 U2AF2P26368 475 aaKnown RBP eCLIP9.56□□□□□ -0.882e-22■□□□□ 8.9
PABPC1-202ENST00000517403 RPA1P27694 616 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 AVPR2P30518 371 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 GLUD2P49448 558 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 CDC42EP1Q00587 391 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 ITIH3Q06033 890 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 MXD4Q14582 209 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 FAM187BQ17R55 369 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 SLC27A1Q6PCB7 646 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 PALB2Q86YC2 1186 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 IGSF22Q8N9C0 903 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 TDRD5Q8NAT2 981 aaKnown RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 URGCPQ8TCY9 931 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 PGBD4Q96DM1 585 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 ZMAT2Q96NC0 199 aaKnown RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 RPP25Q9BUL9 199 aaKnown RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 BHMT2Q9H2M3 363 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 FOXP1Q9H334 677 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-202ENST00000517403 SFXN1Q9H9B4 322 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 PATJQ8NI35 1801 aa9.56□□□□□ -0.88
PABPC1-202ENST00000517403 MYH11P35749 1972 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 MYO15AQ9UKN7 3530 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 NPHP3-ACAD11A0A0J9YXS1 232 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 KRBA1A5PL33 1030 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 ASAP2O43150 1006 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 MARCH6O60337 910 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 DKC1O60832 514 aaKnown RBP eCLIP9.55□□□□□ -0.88
PABPC1-202ENST00000517403 BAG4O95429 457 aaKnown RBP9.55□□□□□ -0.88
PABPC1-202ENST00000517403 KLRC2P26717 231 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 AXLP30530 894 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 BRCC3P46736 316 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 RBM25P49756 843 aaKnown RBP9.55□□□□□ -0.88
PABPC1-202ENST00000517403 GRIK3Q13003 919 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 SEZ6Q53EL9 994 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 CABP7Q86V35 215 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 ZDHHC14Q8IZN3 488 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 CCDC51Q96ER9 411 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 RIPOR3Q96MK2 946 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
PABPC1-202ENST00000517403 CLSTN3Q9BQT9 956 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms