RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ART4Q93070 314 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CNKSR1Q969H4 720 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GJA10Q969M2 543 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 GFM2Q969S9 779 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MIEF2Q96C03 454 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF653Q96CK0 615 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DNAJC19Q96DA6 116 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MTMR8Q96EF0 704 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 STAMBPL1Q96FJ0 436 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MS4A4AQ96JQ5 239 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TSNARE1Q96NA8 513 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PNMA5Q96PV4 448 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PRMT1Q99873 361 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SH3GL3Q99963 347 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SENP7Q9BQF6 1050 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 EIF2AK1Q9BQI3 630 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 REEP2Q9BRK0 252 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TCHPQ9BT92 498 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MMTAG2Q9BU76 263 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NUP85Q9BW27 656 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIM55Q9BYV6 548 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TRIM6Q9C030 488 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF518BQ9C0D4 1074 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DDX47Q9H0S4 455 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCTD10Q9H3F6 313 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PLEKHA4Q9H4M7 779 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 Q9H521 79 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CCDC134Q9H6E4 229 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 LRRC19Q9H756 370 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SYNCQ9H7C4 482 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ECT2Q9H8V3 914 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ATP6V0A4Q9HBG4 840 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 AS3MTQ9HBK9 375 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NOD2Q9HC29 1040 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC40A1Q9NP59 571 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MRPL40Q9NQ50 206 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SAR1AQ9NR31 198 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCNQ5Q9NR82 932 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 C1orf112Q9NSG2 853 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ANKEF1Q9NU02 776 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MRGBPQ9NV56 204 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PARVAQ9NVD7 372 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TMEM260Q9NX78 707 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 EHD2Q9NZN4 543 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TXNDC16Q9P2K2 825 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ANKFY1Q9P2R3 1169 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 THEGQ9P2T0 379 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CTNNAL1Q9UBT7 734 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPP1R1BQ9UD71 204 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CNOT8Q9UFF9 292 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM153AQ9UHL3 310 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SLC24A2Q9UI40 661 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SCOCQ9UIL1 159 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 DBR1Q9UK59 544 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 STRIP2Q9ULQ0 834 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TPX2Q9ULW0 747 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PACSIN2Q9UNF0 486 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TFR2Q9UP52 801 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 AGTPBP1Q9UPW5 1226 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 USTQ9Y2C2 406 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 STK38LQ9Y2H1 464 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PTPN22Q9Y2R2 807 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 MTO1Q9Y2Z2 717 aaKnown RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SNX24Q9Y343 169 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 STARD13Q9Y3M8 1113 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PPME1Q9Y570 386 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PCDHB2Q9Y5E7 798 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 PCDHA3Q9Y5H8 950 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 CAPN6Q9Y6Q1 641 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 ADAMTSL3P82987 1691 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 KCPQ6ZWJ8 1503 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 TAF1P21675 1872 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 NAV1Q8NEY1 1877 aa2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 COL5A2P05997 1499 aaPredicted RBP2.2□□□□□ -2.06
RNU1-40P-201ENST00000516816 SPATA31A1Q5TZJ5 1347 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 EMSYQ7Z589 1322 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 ZNF335Q9H4Z2 1342 aaPredicted RBP2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 RIC1Q4ADV7 1423 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 MICAL3Q7RTP6 2002 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 LAMB2P55268 1798 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 A0A0U1RQJ8 604 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 EXOC1LA0A1B0GW35 172 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 ESYT3A0FGR9 886 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 POTEB3A0JP26 581 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 FRMD3A2A2Y4 597 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 MAGEA13PA6NCF6 341 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 C2orf72A6NCS6 295 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 RCCD1A6NED2 376 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 C5orf60A6NFR6 353 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 FAM47DPA6NHR8 397 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 RASSF10A6NK89 507 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 SFI1A8K8P3 1242 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 TCP11X1B4DZS4 312 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L15C9J2P7 530 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L13C9JLJ4 530 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L11C9JVI0 530 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L18D6R9N7 530 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L22D6RA61 530 aa2.19□□□□□ -2.06
RNU1-40P-201ENST00000516816 USP17L17D6RBQ6 530 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms