RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
TCOF1-215ENST00000515516 SF3B1O75533 1304 aaKnown RBP eCLIP15.03■□□□□ -06e-6■■■■■ 114.9
TCOF1-215ENST00000515516 TMEM221A6NGB7 291 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 TTLL13PA6NNM8 815 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 M0R296 226 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 TEX28O15482 410 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 GLUD1P00367 558 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 PLA2G5P39877 138 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 NPTX2P47972 431 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 YARSP54577 528 aaKnown RBP15.03■□□□□ -0
TCOF1-215ENST00000515516 PTPN21Q16825 1174 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 RINT1Q6NUQ1 792 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 KANK3Q6NY19 840 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 TDRD5Q8NAT2 981 aaKnown RBP15.03■□□□□ -0
TCOF1-215ENST00000515516 RABGGTAQ92696 567 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 ACSF2Q96CM8 615 aaPredicted RBP15.03■□□□□ -0
TCOF1-215ENST00000515516 MRPL4Q9BYD3 311 aaKnown RBP15.03■□□□□ -0
TCOF1-215ENST00000515516 TMEM134Q9H6X4 195 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 RXFP1Q9HBX9 757 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 MAN1C1Q9NR34 630 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 CDH22Q9UJ99 828 aa15.03■□□□□ -0
TCOF1-215ENST00000515516 CASTOR2A6NHX0 329 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 F8W810 466 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 BMP15O95972 392 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 SMTNP53814 917 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 SIGLEC14Q08ET2 396 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 STRN3Q13033 797 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 NT5DC1Q5TFE4 455 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 EEF1DP3Q658K8 133 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 HFE2Q6ZVN8 426 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 C1orf186Q6ZWK4 172 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 BRAPQ7Z569 592 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 GPR149Q86SP6 731 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 GPR65Q8IYL9 337 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 RNF168Q8IYW5 571 aaPredicted RBP15.02■□□□□ -0
TCOF1-215ENST00000515516 RIN2Q8WYP3 895 aaPredicted RBP15.02■□□□□ -0
TCOF1-215ENST00000515516 PBXIP1Q96AQ6 731 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 AK8Q96MA6 479 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 PLIN2Q99541 437 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 TCHPQ9BT92 498 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 MMTAG2Q9BU76 263 aaKnown RBP15.02■□□□□ -0
TCOF1-215ENST00000515516 RUSC1Q9BVN2 902 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 CCDC94Q9BW85 323 aaPredicted RBP15.02■□□□□ -0
TCOF1-215ENST00000515516 GPR62Q9BZJ7 368 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 TOPORSQ9NS56 1045 aaPredicted RBP15.02■□□□□ -0
TCOF1-215ENST00000515516 CHST7Q9NS84 486 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 TNFSF13BQ9Y275 285 aa15.02■□□□□ -0
TCOF1-215ENST00000515516 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 C2CD4DB7Z1M9 353 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 PTGESO14684 152 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 SLC26A4O43511 780 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 EFEMP2O95967 443 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 PDCP20941 246 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 GUCY2CP25092 1073 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 UBA7P41226 1012 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 ELAVL2Q12926 359 aaKnown RBP15.01□□□□□ -0.01
TCOF1-215ENST00000515516 ZNF568Q3ZCX4 644 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 HYIQ5T013 277 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 CYP26C1Q6V0L0 522 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 C15orf39Q6ZRI6 1047 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 CCDC149Q6ZUS6 474 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 CEP57Q86XR8 500 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 PALB2Q86YC2 1186 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 SUGP1Q8IWZ8 645 aaKnown RBP15.01□□□□□ -0.01
TCOF1-215ENST00000515516 SYT2Q8N9I0 419 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-215ENST00000515516 RASSF8Q8NHQ8 419 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 HDAC7Q8WUI4 952 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 CALML4Q96GE6 196 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 ACO2Q99798 780 aaKnown RBP15.01□□□□□ -0.01
TCOF1-215ENST00000515516 TTPALQ9BTX7 342 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 KCND2Q9NZV8 630 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 FNIP2Q9P278 1114 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 USTQ9Y2C2 406 aa15.01□□□□□ -0.01
TCOF1-215ENST00000515516 CCDC195A0A1B0GUA6 201 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 SFI1A8K8P3 1242 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 SLC16A4O15374 487 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 C1RP00736 705 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 EDN1P05305 212 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 PLA2G4BP0C869 781 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 RAD51AP2Q09MP3 1159 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 MTMR3Q13615 1198 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 FAM171A1Q5VUB5 890 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 PDXDC1Q6P996 788 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 OTOP3Q7RTS5 596 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 KCNK18Q7Z418 384 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 BMP8AQ7Z5Y6 402 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 UBALD2Q8IYN6 164 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 ZDHHC14Q8IZN3 488 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 DAW1Q8N136 415 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 KREMEN2Q8NCW0 462 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 CMASQ8NFW8 434 aaPredicted RBP15□□□□□ -0.01
TCOF1-215ENST00000515516 HASPINQ8TF76 798 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 B3GALT6Q96L58 329 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 UROC1Q96N76 676 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 PNMA5Q96PV4 448 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 KCNH6Q9H252 994 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 PLEKHA4Q9H4M7 779 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 PIDD1Q9HB75 910 aa15□□□□□ -0.01
TCOF1-215ENST00000515516 ARHGAP28Q9P2N2 729 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms