RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ST13P5Q8NFI4 369 aaPredicted RBP17.49■□□□□ 0.39
LMNA-223ENST00000515459 ASAP3Q8TDY4 903 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 RABGGTAQ92696 567 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 FOXQ1Q9C009 403 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 KLK14Q9P0G3 267 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 PARP2Q9UGN5 583 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 SF3B1O75533 1304 aaKnown RBP eCLIP17.48■□□□□ 0.391e-6■■■■■ 121.1
LMNA-223ENST00000515459 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 B4GALT5O43286 388 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 CDKL5O76039 1030 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 LYPLA2O95372 231 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 NPTXRO95502 500 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 HNRNPA1P09651 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
LMNA-223ENST00000515459 GLULP15104 373 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 ARL2P36404 184 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 GPC5P78333 572 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 PUM1Q14671 1186 aaKnown RBP eCLIP17.48■□□□□ 0.392e-15■□□□□ 10.7
LMNA-223ENST00000515459 RTP2Q5QGT7 225 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 LIN9Q5TKA1 542 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 GRASPQ7Z6J2 395 aaPredicted RBP17.48■□□□□ 0.39
LMNA-223ENST00000515459 CDR2LQ86X02 465 aaPredicted RBP17.48■□□□□ 0.39
LMNA-223ENST00000515459 FGF14Q92915 247 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 CCDC43Q96MW1 224 aaKnown RBP17.48■□□□□ 0.39
LMNA-223ENST00000515459 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
LMNA-223ENST00000515459 RPP25Q9BUL9 199 aaKnown RBP17.48■□□□□ 0.39
LMNA-223ENST00000515459 ANKEF1Q9NU02 776 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 CDH7Q9ULB5 785 aa17.48■□□□□ 0.39
LMNA-223ENST00000515459 CACNA1IQ9P0X4 2223 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 MED19A0JLT2 244 aaPredicted RBP17.47■□□□□ 0.39
LMNA-223ENST00000515459 POTEMA6NI47 508 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 GLRA2P23416 452 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 PPM1LQ5SGD2 360 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 PARM1Q6UWI2 310 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 MTSS1LQ765P7 747 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 OXER1Q8TDS5 423 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 HSD17B14Q9BPX1 270 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 PAAF1Q9BRP4 392 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 TTPALQ9BTX7 342 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 CACNG4Q9UBN1 327 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 PCDHA12Q9UN75 941 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 PATJQ8NI35 1801 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 STK36Q9NRP7 1315 aa17.47■□□□□ 0.39
LMNA-223ENST00000515459 KANSL1LA0AUZ9 987 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
LMNA-223ENST00000515459 LRRN2O75325 713 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 C8AP07357 584 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 HOXA9P31269 272 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 TUSC3Q13454 348 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 SNW1Q13573 536 aaKnown RBP17.46■□□□□ 0.39
LMNA-223ENST00000515459 FAM171A1Q5VUB5 890 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 CEP57Q86XR8 500 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 SUMF1Q8NBK3 374 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 HASPINQ8TF76 798 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 PIK3R5Q8WYR1 880 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 FGF13Q92913 245 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 CLSTN3Q9BQT9 956 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 BCO2Q9BYV7 579 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 TM6SF1Q9BZW5 370 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 POLR3FQ9H1D9 316 aaPredicted RBP17.46■□□□□ 0.39
LMNA-223ENST00000515459 GJB4Q9NTQ9 266 aa17.46■□□□□ 0.39
LMNA-223ENST00000515459 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
LMNA-223ENST00000515459 XYLBO75191 536 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 RARRES1P49788 294 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 NTHL1P78549 312 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 PRKCQQ04759 706 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 SCRN1Q12765 414 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 PSMD5Q16401 504 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 ZNF528Q3MIS6 628 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
LMNA-223ENST00000515459 MAML2Q8IZL2 1156 aaPredicted RBP17.45■□□□□ 0.38
LMNA-223ENST00000515459 DCLK2Q8N568 766 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 LNX1Q8TBB1 728 aaPredicted RBP17.45■□□□□ 0.38
LMNA-223ENST00000515459 BORCS6Q96GS4 357 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 PRIMPOLQ96LW4 560 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
LMNA-223ENST00000515459 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 POLIQ9UNA4 740 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 OTOGLQ3ZCN5 2332 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 WDR87Q6ZQQ6 2873 aa17.45■□□□□ 0.38
LMNA-223ENST00000515459 DNAH14Q0VDD8 3507 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 DMXL1Q9Y485 3027 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 CASTOR2A6NHX0 329 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 LRRIQ4A6NIV6 560 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 CCL16O15467 120 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 LAMTOR5O43504 91 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 KIF4AO95239 1232 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 PFKPQ01813 784 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 ELAVL2Q12926 359 aaKnown RBP17.44■□□□□ 0.38
LMNA-223ENST00000515459 MLF2Q15773 248 aaPredicted RBP17.44■□□□□ 0.38
LMNA-223ENST00000515459 SLC44A4Q53GD3 710 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 PDXDC1Q6P996 788 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 OSBPL6Q9BZF3 934 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 PRMT7Q9NVM4 692 aaPredicted RBP17.44■□□□□ 0.38
LMNA-223ENST00000515459 SPATA6Q9NWH7 488 aaPredicted RBP17.44■□□□□ 0.38
LMNA-223ENST00000515459 DLL3Q9NYJ7 618 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 FBXO4Q9UKT5 387 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 COL4A3Q01955 1670 aa17.44■□□□□ 0.38
LMNA-223ENST00000515459 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
LMNA-223ENST00000515459 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms