RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ZNF598Q86UK7 904 aaKnown RBP22.86■■□□□ 1.25
LSM6-207ENST00000515311 THNSL1Q8IYQ7 743 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 CEP120Q8N960 986 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.86■■□□□ 1.25
LSM6-207ENST00000515311 FAM213AQ9BRX8 229 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 MKNK1Q9BUB5 465 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 TMEM161AQ9NX61 479 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 CPSF3Q9UKF6 684 aaKnown RBP22.86■■□□□ 1.25
LSM6-207ENST00000515311 FRMD4BQ9Y2L6 1034 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 ANK1P16157 1881 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 SLC16A3O15427 465 aaKnown RBP22.85■■□□□ 1.25
LSM6-207ENST00000515311 ACOT2P49753 483 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 SNRNP35Q16560 246 aaKnown RBP22.85■■□□□ 1.25
LSM6-207ENST00000515311 TPD52L1Q16890 204 aaPredicted RBP22.85■■□□□ 1.25
LSM6-207ENST00000515311 ZBTB41Q5SVQ8 909 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 OTOP2Q7RTS6 562 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 CRIPAKQ8N1N5 446 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 NOC3LQ8WTT2 800 aaKnown RBP22.85■■□□□ 1.25
LSM6-207ENST00000515311 HERVK_113Q902F9 699 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 HES2Q9Y543 173 aa22.85■■□□□ 1.25
LSM6-207ENST00000515311 GOLGA8IPA6NC78 632 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 ZNF233A6NK53 670 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 GOLGA8JA6NMD2 632 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 H0YGN5 161 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 AMHP03971 560 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 ITGA4P13612 1032 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 PSMC2P35998 433 aaKnown RBP22.84■■□□□ 1.25
LSM6-207ENST00000515311 WDR5P61964 334 aaKnown RBP22.84■■□□□ 1.25
LSM6-207ENST00000515311 SEZ6Q53EL9 994 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 CEP135Q66GS9 1140 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 CBWD2Q8IUF1 395 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 NPAS4Q8IUM7 802 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 ZSWIM2Q8NEG5 633 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 FAM200AQ8TCP9 573 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 ACAP3Q96P50 834 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 SRRTQ9BXP5 876 aaKnown RBP22.84■■□□□ 1.25
LSM6-207ENST00000515311 MTIF3Q9H2K0 278 aaKnown RBP22.84■■□□□ 1.25
LSM6-207ENST00000515311 THAP9Q9H5L6 903 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 UBN1Q9NPG3 1134 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 TOPORSQ9NS56 1045 aaPredicted RBP22.84■■□□□ 1.25
LSM6-207ENST00000515311 SNTG2Q9NY99 539 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 NFE2L3Q9Y4A8 694 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 PTPRSQ13332 1948 aa22.84■■□□□ 1.25
LSM6-207ENST00000515311 PDCD11Q14690 1871 aaKnown RBP22.83■■□□□ 1.25
LSM6-207ENST00000515311 SMTNL1A8MU46 457 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 AKAP3O75969 853 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 RECQL4O94761 1208 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 GNA14O95837 355 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 TNFSF9P41273 254 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 KCNJ6P48051 423 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 CASP4P49662 377 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 YARSP54577 528 aaKnown RBP22.83■■□□□ 1.25
LSM6-207ENST00000515311 OSTNP61366 133 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 ENOX2Q16206 610 aaKnown RBP22.83■■□□□ 1.25
LSM6-207ENST00000515311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.83■■□□□ 1.25
LSM6-207ENST00000515311 FILIP1Q7Z7B0 1213 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 DHX40Q8IX18 779 aaKnown RBP22.83■■□□□ 1.25
LSM6-207ENST00000515311 TMEM192Q8IY95 271 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 AOPEPQ8N6M6 819 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 EEF2KMTQ96G04 330 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 PLEKHA5Q9HAU0 1116 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 CBX8Q9HC52 389 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 RBAKQ9NYW8 714 aaPredicted RBP22.83■■□□□ 1.25
LSM6-207ENST00000515311 GIT1Q9Y2X7 761 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 PCDHB7Q9Y5E2 793 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 PDE4DIPQ5VU43 2346 aa22.83■■□□□ 1.25
LSM6-207ENST00000515311 ADRB2P07550 413 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 EPB41P11171 864 aaKnown RBP22.82■■□□□ 1.24
LSM6-207ENST00000515311 NCAPHQ15003 741 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 IQCB1Q15051 598 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 AGMOQ6ZNB7 445 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 BRSK2Q8IWQ3 736 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 FAM186BQ8IYM0 893 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 RSPH1Q8WYR4 309 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 MFSD14AQ96MC6 490 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 GDF15Q99988 308 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 APOL6Q9BWW8 343 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 RNF39Q9H2S5 420 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 RPF1Q9H9Y2 349 aaKnown RBP22.82■■□□□ 1.24
LSM6-207ENST00000515311 LRFN2Q9ULH4 789 aa22.82■■□□□ 1.24
LSM6-207ENST00000515311 TTC26A0AVF1 554 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 HOXA2O43364 376 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 IL18RAPO95256 599 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 CXCL8P10145 99 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 AKAP5P24588 427 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 MARSP56192 900 aaKnown RBP22.81■■□□□ 1.24
LSM6-207ENST00000515311 MLLT1Q03111 559 aaPredicted RBP22.81■■□□□ 1.24
LSM6-207ENST00000515311 ENPEPQ07075 957 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 CYP24A1Q07973 514 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 SLC10A6Q3KNW5 377 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 RASIP1Q5U651 963 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 INTS8Q75QN2 995 aaKnown RBP22.81■■□□□ 1.24
LSM6-207ENST00000515311 FAM114A1Q8IWE2 563 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 RDH13Q8NBN7 331 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 RNF169Q8NCN4 708 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 LPPQ93052 612 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 TOP1MTQ969P6 601 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 SNX27Q96L92 541 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 RSAD1Q9HA92 442 aa22.81■■□□□ 1.24
LSM6-207ENST00000515311 PARP2Q9UGN5 583 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms