RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 DZANK1Q9NVP4 752 aa26.91■■□□□ 1.9
SNF8-213ENST00000514929 NPHP3-ACAD11A0A0J9YXS1 232 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 PTGESO14684 152 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 CNPP09543 421 aaKnown RBP26.9■■□□□ 1.9
SNF8-213ENST00000514929 ALADP13716 330 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 KLRC2P26717 231 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 GLUD2P49448 558 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 STRN3Q13033 797 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 CBX2Q14781 532 aaPredicted RBP26.9■■□□□ 1.9
SNF8-213ENST00000514929 ZNF568Q3ZCX4 644 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 KIAA1841Q6NSI8 718 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 CES5AQ6NT32 575 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 TAS1R3Q7RTX0 852 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 TAS1R1Q7RTX1 841 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 GPBP1Q86WP2 473 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 SLC22A17Q8WUG5 538 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 SNX21Q969T3 373 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 TARS2Q9BW92 718 aaKnown RBP26.9■■□□□ 1.9
SNF8-213ENST00000514929 ADAM28Q9UKQ2 775 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 MTMR6Q9Y217 621 aa26.9■■□□□ 1.9
SNF8-213ENST00000514929 CASTOR2A6NHX0 329 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 LILRB3O75022 631 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 PLCG1P19174 1290 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 MARCKSP29966 332 aaPredicted RBP26.89■■□□□ 1.9
SNF8-213ENST00000514929 CACNB1Q02641 598 aaPredicted RBP26.89■■□□□ 1.9
SNF8-213ENST00000514929 CEBPZQ03701 1054 aaKnown RBP26.89■■□□□ 1.9
SNF8-213ENST00000514929 HSP90AA2PQ14568 343 aaPredicted RBP26.89■■□□□ 1.9
SNF8-213ENST00000514929 PTPAQ15257 358 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 ARSHQ5FYA8 562 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 FUT10Q6P4F1 479 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 RNF168Q8IYW5 571 aaPredicted RBP26.89■■□□□ 1.9
SNF8-213ENST00000514929 TCHPQ9BT92 498 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 CDT1Q9H211 546 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 LARSQ9P2J5 1176 aaKnown RBP26.89■■□□□ 1.9
SNF8-213ENST00000514929 CACNG4Q9UBN1 327 aa26.89■■□□□ 1.9
SNF8-213ENST00000514929 DCXO43602 365 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 STX6O43752 255 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 TADA2AO75478 443 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 EFEMP2O95967 443 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 ITIH3Q06033 890 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 ZBTB33Q86T24 672 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 RPGRIP1Q96KN7 1286 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 CCDC94Q9BW85 323 aaPredicted RBP26.88■■□□□ 1.89
SNF8-213ENST00000514929 CXCL16Q9H2A7 254 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 ZSCAN16Q9H4T2 348 aaPredicted RBP26.88■■□□□ 1.89
SNF8-213ENST00000514929 BLOC1S4Q9NUP1 217 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 ODF2LQ9ULJ1 636 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 MYH11P35749 1972 aa26.88■■□□□ 1.89
SNF8-213ENST00000514929 SPDYE4A6NLX3 237 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 KRT18P05783 430 aaKnown RBP26.87■■□□□ 1.89
SNF8-213ENST00000514929 GRM5P41594 1212 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 YARSP54577 528 aaKnown RBP26.87■■□□□ 1.89
SNF8-213ENST00000514929 MCM6Q14566 821 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 RARS2Q5T160 578 aaKnown RBP26.87■■□□□ 1.89
SNF8-213ENST00000514929 HSCBQ8IWL3 235 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 TMEM161BQ8NDZ6 487 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 LRRC15Q8TF66 581 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 RAD54LQ92698 747 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 REEP2Q9BRK0 252 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 PAAF1Q9BRP4 392 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 GPR62Q9BZJ7 368 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 CCSER1Q9C0I3 900 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 ADAM7Q9H2U9 754 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 PTPRHQ9HD43 1115 aa26.87■■□□□ 1.89
SNF8-213ENST00000514929 FBXO2Q9UK22 296 aaPredicted RBP26.87■■□□□ 1.89
SNF8-213ENST00000514929 LOC730098B7Z3J9 87 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 H0YCG3 227 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 ADH1AP07327 375 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 CLCN4P51793 760 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 OSTNP61366 133 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 DSG1Q02413 1049 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 USP41Q3LFD5 358 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 GLRA4Q5JXX5 417 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 TMEM31Q5JXX7 168 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 SPECC1Q5M775 1068 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 KIAA0319Q5VV43 1072 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 MPZL3Q6UWV2 235 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 RNF135Q8IUD6 432 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 C12orf76Q8N812 135 aaPredicted RBP26.86■■□□□ 1.89
SNF8-213ENST00000514929 CEP120Q8N960 986 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 EPSTI1Q96J88 318 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 FBXL18Q96ME1 805 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 TOPORSQ9NS56 1045 aaPredicted RBP26.86■■□□□ 1.89
SNF8-213ENST00000514929 CHST7Q9NS84 486 aa26.86■■□□□ 1.89
SNF8-213ENST00000514929 SRPRBQ9Y5M8 271 aaKnown RBP26.86■■□□□ 1.89
SNF8-213ENST00000514929 SF3B1O75533 1304 aaKnown RBP eCLIP26.86■■□□□ 1.89
SNF8-213ENST00000514929 FAM13AO94988 1023 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 MAPTP10636 758 aaKnown RBP26.85■■□□□ 1.89
SNF8-213ENST00000514929 MCF2P10911 925 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 HARSP12081 509 aaKnown RBP26.85■■□□□ 1.89
SNF8-213ENST00000514929 NAB2Q15742 525 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 HASPINQ8TF76 798 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 LARP4BQ92615 738 aaKnown RBP26.85■■□□□ 1.89
SNF8-213ENST00000514929 B3GALT6Q96L58 329 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 NECTIN4Q96NY8 510 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 CCDC39Q9UFE4 941 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 CDH22Q9UJ99 828 aa26.85■■□□□ 1.89
SNF8-213ENST00000514929 TEX28O15482 410 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 TOM1L1O75674 476 aa26.84■■□□□ 1.89
SNF8-213ENST00000514929 KIF4AO95239 1232 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms