RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 PATE3B3GLJ2 98 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 ATG13O75143 517 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 GBP1P32455 592 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 MAPK8P45983 427 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 CFHR1Q03591 330 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 SEMA3BQ13214 749 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 FAM78AQ5JUQ0 283 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 PDXDC1Q6P996 788 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 VITQ6UXI7 678 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 MYO9AB2RTY4 2548 aa13.36□□□□□ -0.27
SFXN1-210ENST00000513725 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
SFXN1-210ENST00000513725 EML5Q05BV3 1969 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 B4E1Z4 1266 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 ZNF862O60290 1169 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 RHOP08100 348 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 CEBPBP17676 345 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 ATP4AP20648 1035 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 KIF5BP33176 963 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 CCINQ13939 588 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 SLC5A9Q2M3M2 681 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 SWSAP1Q6NVH7 229 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 MIS18BP1Q6P0N0 1132 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 RTL10Q7L3V2 364 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 TRMT1LQ7Z2T5 733 aaKnown RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 CYP2U1Q7Z449 544 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 HDDC3Q8N4P3 179 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 LINC01465Q8N7H1 131 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 ADAMTS14Q8WXS8 1223 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 NUSAP1Q9BXS6 441 aaKnown RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
SFXN1-210ENST00000513725 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 AVENQ9NQS1 362 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 EVLQ9UI08 416 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-210ENST00000513725 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
SFXN1-210ENST00000513725 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 DCLK1O15075 740 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 POTEHQ6S545 545 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
SFXN1-210ENST00000513725 MRPL10Q7Z7H8 261 aaKnown RBP13.34□□□□□ -0.27
SFXN1-210ENST00000513725 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 MXRA8Q9BRK3 442 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 UBN1Q9NPG3 1134 aa13.34□□□□□ -0.27
SFXN1-210ENST00000513725 MYBPHLA2RUH7 354 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 SPDYE3A6NKU9 549 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 F8W810 466 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 ARNTLO00327 626 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 CYTH3O43739 400 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 SOX9P48436 509 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 FAM193AP78312 1265 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 ITGB3BPQ13352 177 aaPredicted RBP13.33□□□□□ -0.28
SFXN1-210ENST00000513725 PON2Q15165 354 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 SLC35G1Q2M3R5 365 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 MFSD6LQ8IWD5 586 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 PIP4K2CQ8TBX8 421 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.28
SFXN1-210ENST00000513725 DDX39AO00148 427 aaKnown RBP13.32□□□□□ -0.28
SFXN1-210ENST00000513725 ZNF197O14709 1029 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 WISP1O95388 367 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 CCNE2O96020 404 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 PTPN2P17706 415 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 CTHP32929 405 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 DSC1Q08554 894 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 TRIM61Q5EBN2 209 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 PIBF1Q8WXW3 757 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 AGO4Q9HCK5 861 aaKnown RBP13.32□□□□□ -0.28
SFXN1-210ENST00000513725 ZSWIM5Q9P217 1185 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
SFXN1-210ENST00000513725 PLXNB3Q9ULL4 1909 aa13.32□□□□□ -0.28
SFXN1-210ENST00000513725 ANKRD17O75179 2603 aaKnown RBP13.31□□□□□ -0.28
SFXN1-210ENST00000513725 ZNF213O14771 459 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 CHADO15335 359 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 TADA2AO75478 443 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 MICAL2O94851 1124 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 ENGP17813 658 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 ATXN3P54252 364 aaPredicted RBP13.31□□□□□ -0.28
SFXN1-210ENST00000513725 PSMD5Q16401 504 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 RTP2Q5QGT7 225 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 PKN3Q6P5Z2 889 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 PIGKQ92643 395 aa13.31□□□□□ -0.28
SFXN1-210ENST00000513725 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms