RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FAM102BQ5T8I3 360 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 LRCH2Q5VUJ6 765 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 GALNT17Q6IS24 598 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 TRMT1LQ7Z2T5 733 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 RBM23Q86U06 439 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 SKAP1Q86WV1 359 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 COLGALT1Q8NBJ5 622 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 RASGRP4Q8TDF6 673 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 TMEM40Q8WWA1 233 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 RSPH1Q8WYR4 309 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 SLC5A5Q92911 643 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 GLMNQ92990 594 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 TNFRSF25Q93038 417 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 LENG9Q96B70 501 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 PPP1R16BQ96T49 567 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 TYW1Q9NV66 732 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 VPS54Q9P1Q0 977 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 CHMP2AO43633 222 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 DEXIO95424 95 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 EOMESO95936 686 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 FGFR1P11362 822 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 Q4G0T1 1027 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 XKR3Q5GH77 459 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 HERC4Q5GLZ8 1057 aaPredicted RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 SH3PXD2AQ5TCZ1 1133 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 RUFY3Q7L099 469 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 MIER3Q7Z3K6 550 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 ADGRD2Q7Z7M1 963 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 LRRC43Q8N309 656 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 LRRC71Q8N4P6 559 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 LINC01465Q8N7H1 131 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 SMRP1Q8NCR6 262 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 TBCKQ8TEA7 893 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 MRPS27Q92552 414 aaKnown RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 ZNF274Q96GC6 653 aaPredicted RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 ZNF558Q96NG5 402 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 JPH2Q9BR39 696 aaPredicted RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 GCOM2Q9BZD3 368 aaPredicted RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 INO80BQ9C086 356 aaPredicted RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 PHACTR1Q9C0D0 580 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 ADAMTS10Q9H324 1103 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 NGRNQ9NPE2 291 aaKnown RBP8.07□□□□□ -1.12
USP46-208ENST00000512656 CHST12Q9NRB3 414 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 DACT1Q9NYF0 836 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 CLEC1BQ9P126 229 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 PCDHA4Q9UN74 947 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 CYP46A1Q9Y6A2 500 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 ZDBF2Q9HCK1 2354 aa8.07□□□□□ -1.12
USP46-208ENST00000512656 CYP3A7-CYP3A51PA0A087WV96 503 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 A0A0U1RQF3 1178 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 ADAMTS3O15072 1205 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 ZNF862O60290 1169 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 DKC1O60832 514 aaKnown RBP eCLIP8.06□□□□□ -1.12
USP46-208ENST00000512656 PSMD10O75832 226 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 CDKL5O76039 1030 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 DARSP14868 501 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 ATF7P17544 494 aaPredicted RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 XBP1P17861 261 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 SFPQP23246 707 aaKnown RBP eCLIP8.06□□□□□ -1.12
USP46-208ENST00000512656 CYP3A7P24462 503 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 GPC3P51654 580 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 SEC13P55735 322 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 ERVFC1P60507 584 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 CCT2P78371 535 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 DUSP6Q16828 381 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 KCNT2Q6UVM3 1135 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 MOXD1Q6UVY6 613 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 KRT25Q7Z3Z0 450 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 ECHDC2Q86YB7 292 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 EXOC8Q8IYI6 725 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 BLIDQ8IZY5 108 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 TSEN2Q8NCE0 465 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 RNF169Q8NCN4 708 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 EDAQ92838 391 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 PHF7Q9BWX1 381 aaPredicted RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 MRPL9Q9BYD2 267 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 TM6SF1Q9BZW5 370 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 UNC45AQ9H3U1 944 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 CWH43Q9H720 699 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 NCOA5Q9HCD5 579 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 ENTPD7Q9NQZ7 604 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 SPG21Q9NZD8 308 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 MUTYHQ9UIF7 546 aa8.06□□□□□ -1.12
USP46-208ENST00000512656 BARX2Q9UMQ3 279 aaPredicted RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 USP15Q9Y4E8 981 aaPredicted RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 MYH9P35579 1960 aaKnown RBP8.06□□□□□ -1.12
USP46-208ENST00000512656 LOC730098B7Z3J9 87 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 K7ELQ4 463 aaPredicted RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 FSCN2O14926 492 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 PER2O15055 1255 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 SPATA31C1P0DKV0 1188 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 HOXB8P17481 243 aaPredicted RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 ALDH7A1P49419 539 aaKnown RBP8.05□□□□□ -1.12
USP46-208ENST00000512656 SPEM2Q0P670 501 aa8.05□□□□□ -1.12
USP46-208ENST00000512656 SFSWAPQ12872 951 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms