RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 ITKQ08881 620 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 PTPROQ16827 1216 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 LSM12Q3MHD2 195 aaKnown RBP6.17□□□□□ -1.42
PDE4D-220ENST00000512069 OR52N2Q8NGI0 321 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 CACTINQ8WUQ7 758 aaKnown RBP6.17□□□□□ -1.42
PDE4D-220ENST00000512069 ADI1Q9BV57 179 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 ZBTB21Q9ULJ3 1066 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 HDAC5Q9UQL6 1122 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 PCDHGA2Q9Y5H1 932 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 DNMBPQ6XZF7 1577 aa6.17□□□□□ -1.42
PDE4D-220ENST00000512069 ABCC8Q09428 1581 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 TBKBP1A7MCY6 615 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 B5MCH6 92 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 OSMP13725 252 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 WASP42768 502 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 EVA1CP58658 441 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 VPS72Q15906 364 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 PRAMEF14Q5SWL7 426 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 DRICH1Q6PGQ1 229 aaPredicted RBP6.16□□□□□ -1.42
PDE4D-220ENST00000512069 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
PDE4D-220ENST00000512069 MB21D1Q8N884 522 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 MDM1Q8TC05 714 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 HOXB13Q92826 284 aaPredicted RBP6.16□□□□□ -1.42
PDE4D-220ENST00000512069 SORCS2Q96PQ0 1159 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 CCDC8Q9H0W5 538 aaPredicted RBP6.16□□□□□ -1.42
PDE4D-220ENST00000512069 MKS1Q9NXB0 559 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 ING1Q9UK53 422 aaPredicted RBP6.16□□□□□ -1.42
PDE4D-220ENST00000512069 TRHDEQ9UKU6 1024 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 SPEF1Q9Y4P9 236 aa6.16□□□□□ -1.42
PDE4D-220ENST00000512069 ANKRD62A6NC57 917 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 KLHL33A6NCF5 533 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 GRXCR1A8MXD5 290 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 GABRDO14764 452 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 KATNA1O75449 491 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 HK1P19367 917 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 ECHS1P30084 290 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 SREBF1P36956 1147 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 FLT3LGP49771 235 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 MGAT2Q10469 447 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 KLF10Q13118 480 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 TOB2Q14106 344 aaPredicted RBP6.15□□□□□ -1.42
PDE4D-220ENST00000512069 BMT2Q1RMZ1 405 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 RABL3Q5HYI8 236 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 MFSD14BQ5SR56 506 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 USP51Q70EK9 711 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 ZNF572Q7Z3I7 529 aaPredicted RBP6.15□□□□□ -1.42
PDE4D-220ENST00000512069 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.15□□□□□ -1.42
PDE4D-220ENST00000512069 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
PDE4D-220ENST00000512069 PGBD4Q96DM1 585 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 FUBP3Q96I24 572 aaKnown RBP eCLIP6.15□□□□□ -1.42
PDE4D-220ENST00000512069 SLC2A13Q96QE2 648 aa6.15□□□□□ -1.42
PDE4D-220ENST00000512069 CPEB1Q9BZB8 566 aaKnown RBP6.15□□□□□ -1.42
PDE4D-220ENST00000512069 ATRNL1Q5VV63 1379 aa6.15□□□□□ -1.43
PDE4D-220ENST00000512069 ADGRL1O94910 1474 aa6.15□□□□□ -1.43
PDE4D-220ENST00000512069 TSPOAP1O95153 1857 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 SHTN1A0MZ66 631 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PRR5-ARHGAP8B1AHC4 643 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PJA2O43164 708 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PCDHGA12O60330 932 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 ENDOD1O94919 500 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 ZNF202O95125 648 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 IBSPP21815 317 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PTPN7P35236 360 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 IARSP41252 1262 aaKnown RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 SP140Q13342 867 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 FAM50AQ14320 339 aaKnown RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 NOMO1Q15155 1222 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 CSRP2Q16527 193 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 ANKS6Q68DC2 871 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 XYLT1Q86Y38 959 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PQLC1Q8N2U9 271 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 JADE3Q92613 823 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 CYFIP2Q96F07 1278 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 CEP95Q96GE4 821 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 NDC1Q9BTX1 674 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 KCNH6Q9H252 994 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 DMRT3Q9NQL9 472 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 NOP58Q9Y2X3 529 aaKnown RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PCDHGA9Q9Y5G4 932 aaKnown RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PCDHGA8Q9Y5G5 932 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PCDHGA7Q9Y5G6 932 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PCDHGA6Q9Y5G7 932 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 PCDHGA3Q9Y5H0 932 aa6.14□□□□□ -1.43
PDE4D-220ENST00000512069 MAGI1Q96QZ7 1491 aaPredicted RBP6.14□□□□□ -1.43
PDE4D-220ENST00000512069 FAM171A2A8MVW0 826 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 FZD9O00144 591 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 CYR61O00622 381 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 ADCY6O43306 1168 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 MYBL2P10244 700 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 ALOX15P16050 662 aaPredicted RBP6.13□□□□□ -1.43
PDE4D-220ENST00000512069 PER3P56645 1201 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 SLC25A3Q00325 362 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 TUBA3CQ13748 450 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 SEPT2Q15019 361 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 CLUL1Q15846 466 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 FNDC7Q5VTL7 733 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 TUBA3EQ6PEY2 450 aa6.13□□□□□ -1.43
PDE4D-220ENST00000512069 REPS2Q8NFH8 660 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms