RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 FZD8Q9H461 694 aa25.32■■□□□ 1.64
SMAD5-207ENST00000511116 CACNA1AO00555 2505 aa25.32■■□□□ 1.64
SMAD5-207ENST00000511116 DOCK6Q96HP0 2047 aa25.31■■□□□ 1.64
SMAD5-207ENST00000511116 BTBD18B2RXH4 712 aa25.31■■□□□ 1.64
SMAD5-207ENST00000511116 ZMYND10O75800 440 aa25.31■■□□□ 1.64
SMAD5-207ENST00000511116 HSP90AA2PQ14568 343 aaPredicted RBP25.31■■□□□ 1.64
SMAD5-207ENST00000511116 ME3Q16798 604 aa25.31■■□□□ 1.64
SMAD5-207ENST00000511116 NSUN7Q8NE18 718 aaKnown RBP25.31■■□□□ 1.64
SMAD5-207ENST00000511116 PAAF1Q9BRP4 392 aa25.31■■□□□ 1.64
SMAD5-207ENST00000511116 PRMT7Q9NVM4 692 aaPredicted RBP25.31■■□□□ 1.64
SMAD5-207ENST00000511116 SF3B1O75533 1304 aaKnown RBP eCLIP25.31■■□□□ 1.642e-7■■■■■ 101.3
SMAD5-207ENST00000511116 LARGE1O95461 756 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 CFHP08603 1231 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 MYBP10242 640 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 TXKP42681 527 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 FOXK2Q01167 660 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 TUSC3Q13454 348 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 HTR4Q13639 388 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 NAB2Q15742 525 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 RTP2Q5QGT7 225 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 PHLDB3Q6NSJ2 640 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 DIS3L2Q8IYB7 885 aaKnown RBP25.3■■□□□ 1.64
SMAD5-207ENST00000511116 MCPH1Q8NEM0 835 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 CCDC43Q96MW1 224 aaKnown RBP25.3■■□□□ 1.64
SMAD5-207ENST00000511116 GPRC5CQ9NQ84 441 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 SLC2A4RGQ9NR83 387 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 KLK14Q9P0G3 267 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 FBXW11Q9UKB1 542 aa25.3■■□□□ 1.64
SMAD5-207ENST00000511116 ZFP37Q9Y6Q3 630 aaPredicted RBP25.3■■□□□ 1.64
SMAD5-207ENST00000511116 POTEMA6NI47 508 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 PTGESO14684 152 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 USO1O60763 962 aaKnown RBP25.29■■□□□ 1.64
SMAD5-207ENST00000511116 RPL17P18621 184 aaKnown RBP25.29■■□□□ 1.64
SMAD5-207ENST00000511116 NECAB1Q8N987 351 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 PIK3R5Q8WYR1 880 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 TMEM60Q9H2L4 133 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 TUFT1Q9NNX1 390 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 PARP2Q9UGN5 583 aa25.29■■□□□ 1.64
SMAD5-207ENST00000511116 LRRIQ4A6NIV6 560 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 TTLL13PA6NNM8 815 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 TADA2AO75478 443 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 PRSS55Q6UWB4 352 aaPredicted RBP25.28■■□□□ 1.64
SMAD5-207ENST00000511116 CATSPER3Q86XQ3 398 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 RABGGTAQ92696 567 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 CLSTN3Q9BQT9 956 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 PDZD7Q9H5P4 517 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 TBC1D17Q9HA65 648 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 PIDD1Q9HB75 910 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 DLGAP2Q9P1A6 1054 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 CACNG4Q9UBN1 327 aa25.28■■□□□ 1.64
SMAD5-207ENST00000511116 A0A087WWV3 80 aa25.27■■□□□ 1.64
SMAD5-207ENST00000511116 LNX1Q8TBB1 728 aaPredicted RBP25.27■■□□□ 1.64
SMAD5-207ENST00000511116 GPR152Q8TDT2 470 aa25.27■■□□□ 1.64
SMAD5-207ENST00000511116 TTPALQ9BTX7 342 aa25.27■■□□□ 1.64
SMAD5-207ENST00000511116 POLR3CQ9BUI4 534 aaPredicted RBP25.27■■□□□ 1.64
SMAD5-207ENST00000511116 CCDC113Q9H0I3 377 aa25.27■■□□□ 1.64
SMAD5-207ENST00000511116 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
SMAD5-207ENST00000511116 VWA8A3KMH1 1905 aa25.27■■□□□ 1.64
SMAD5-207ENST00000511116 N4BP3O15049 544 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 MED24O75448 989 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 KIF4AO95239 1232 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 POU2F2P09086 479 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 HNRNPA1P09651 372 aaKnown RBP eCLIP25.26■■□□□ 1.63
SMAD5-207ENST00000511116 HOXA9P31269 272 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 GET4Q7L5D6 327 aaPredicted RBP25.26■■□□□ 1.63
SMAD5-207ENST00000511116 GLYCTKQ8IVS8 523 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 ADSSL1Q8N142 457 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 BSNDQ8WZ55 320 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 C2orf40Q9H1Z8 148 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 SEMA4AQ9H3S1 761 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 CA14Q9ULX7 337 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 OTOGLQ3ZCN5 2332 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 DMXL1Q9Y485 3027 aa25.26■■□□□ 1.63
SMAD5-207ENST00000511116 FANCMQ8IYD8 2048 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 FRYLO94915 3013 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 ZBTB8OSQ8IWT0 167 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 NACC1Q96RE7 527 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 CXCL16Q9H2A7 254 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 ARHGEF3Q9NR81 526 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 NUMBLQ9Y6R0 609 aa25.25■■□□□ 1.63
SMAD5-207ENST00000511116 CASTOR2A6NHX0 329 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 ACKR2O00590 384 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 JAK2O60674 1132 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 RECQL4O94761 1208 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 EDN1P05305 212 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 THP07101 528 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 FSHRP23945 695 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 ELAVL2Q12926 359 aaKnown RBP25.24■■□□□ 1.63
SMAD5-207ENST00000511116 MAEAQ7L5Y9 396 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 SNTG2Q9NY99 539 aa25.24■■□□□ 1.63
SMAD5-207ENST00000511116 CACNA1IQ9P0X4 2223 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 TMEM189-UBE2V1I3L0A0 370 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 CYP11B2P19099 503 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 ATP2B1P20020 1258 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 RPA1P27694 616 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 NAMPTP43490 491 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 ST3GAL1Q11201 340 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 PSMD5Q16401 504 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 MAPK6Q16659 721 aa25.23■■□□□ 1.63
SMAD5-207ENST00000511116 FAM171A1Q5VUB5 890 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms