RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 PHLPP2Q6ZVD8 1323 aa29.39■■■□□ 2.3
SNF8-208ENST00000510195 TTLL13PA6NNM8 815 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 GLUD1P00367 558 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 THP07101 528 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 SP100P23497 879 aaPredicted RBP29.38■■■□□ 2.29
SNF8-208ENST00000510195 KANK3Q6NY19 840 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 SUGP1Q8IWZ8 645 aaKnown RBP29.38■■■□□ 2.29
SNF8-208ENST00000510195 TMX3Q96JJ7 454 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 PRRX2Q99811 253 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 GPR62Q9BZJ7 368 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 SNTG2Q9NY99 539 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 MYO10Q9HD67 2058 aa29.38■■■□□ 2.29
SNF8-208ENST00000510195 TADA2AO75478 443 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 MTMR3Q13615 1198 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 HSP90AA2PQ14568 343 aaPredicted RBP29.37■■■□□ 2.29
SNF8-208ENST00000510195 FBXL6Q8N531 539 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 KREMEN2Q8NCW0 462 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 ACSF2Q96CM8 615 aaPredicted RBP29.37■■■□□ 2.29
SNF8-208ENST00000510195 PLEKHA4Q9H4M7 779 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 C17orf75Q9HAS0 396 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 ZDBF2Q9HCK1 2354 aa29.37■■■□□ 2.29
SNF8-208ENST00000510195 F8W810 466 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 K7ERI5 159 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 PAPLNO95428 1278 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 MCTP1Q6DN14 999 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 CCDC149Q6ZUS6 474 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 OTOP3Q7RTS5 596 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 MAN1C1Q9NR34 630 aa29.36■■■□□ 2.29
SNF8-208ENST00000510195 SF3B1O75533 1304 aaKnown RBP eCLIP29.36■■■□□ 2.29
SNF8-208ENST00000510195 PTGESO14684 152 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 RECQL4O94761 1208 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 ATP2C1P98194 919 aaPredicted RBP29.35■■■□□ 2.29
SNF8-208ENST00000510195 IL17AQ16552 155 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 DRC1Q96MC2 740 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 TIPINQ9BVW5 301 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 TMEM134Q9H6X4 195 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 KCNG1Q9UIX4 513 aa29.35■■■□□ 2.29
SNF8-208ENST00000510195 RBM19Q9Y4C8 960 aaKnown RBP29.35■■■□□ 2.29
SNF8-208ENST00000510195 DENND4AQ7Z401 1863 aa29.34■■■□□ 2.29
SNF8-208ENST00000510195 E9PMD0 336 aa29.34■■■□□ 2.29
SNF8-208ENST00000510195 LIG1P18858 919 aa29.34■■■□□ 2.29
SNF8-208ENST00000510195 ATF7IP2Q5U623 682 aa29.34■■■□□ 2.29
SNF8-208ENST00000510195 KIFC3Q9BVG8 833 aa29.34■■■□□ 2.29
SNF8-208ENST00000510195 TNFSF13BQ9Y275 285 aa29.34■■■□□ 2.29
SNF8-208ENST00000510195 H3BQV1 296 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 EDN1P05305 212 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 GJB2P29033 226 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 ELAVL2Q12926 359 aaKnown RBP29.33■■■□□ 2.29
SNF8-208ENST00000510195 DMP1Q13316 513 aaPredicted RBP29.33■■■□□ 2.29
SNF8-208ENST00000510195 NAB2Q15742 525 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 HYIQ5T013 277 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 NT5DC1Q5TFE4 455 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 EEF1DP3Q658K8 133 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 ARL6IP4Q66PJ3 421 aaKnown RBP29.33■■■□□ 2.29
SNF8-208ENST00000510195 MMTAG2Q9BU76 263 aaKnown RBP29.33■■■□□ 2.29
SNF8-208ENST00000510195 POLD4Q9HCU8 107 aa29.33■■■□□ 2.29
SNF8-208ENST00000510195 CCDC195A0A1B0GUA6 201 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 NPTX2P47972 431 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 PEX3P56589 373 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 RINT1Q6NUQ1 792 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 PDXDC1Q6P996 788 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 C1orf186Q6ZWK4 172 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 RIN2Q8WYP3 895 aaPredicted RBP29.32■■■□□ 2.28
SNF8-208ENST00000510195 NT5C3AQ9H0P0 336 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 LIMD1Q9UGP4 676 aa29.32■■■□□ 2.28
SNF8-208ENST00000510195 MTCL1Q9Y4B5 1905 aaKnown RBP29.32■■■□□ 2.28
SNF8-208ENST00000510195 CCDC169A6NNP5 214 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 PP2D1A8MPX8 630 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 HIP1RO75146 1068 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 CDC25AP30304 524 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 LILRA6Q6PI73 481 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 DAW1Q8N136 415 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 STAMQ92783 540 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 PAAF1Q9BRP4 392 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 TTPALQ9BTX7 342 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 ZDHHC7Q9NXF8 308 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 ARHGAP28Q9P2N2 729 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 USP20Q9Y2K6 914 aa29.31■■■□□ 2.28
SNF8-208ENST00000510195 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.31■■■□□ 2.28
SNF8-208ENST00000510195 CASTOR2A6NHX0 329 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 TGM5O43548 720 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 BRD1O95696 1058 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 GUCY2CP25092 1073 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 NHLH1Q02575 133 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 B3GALT6Q96L58 329 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 ACO2Q99798 780 aaKnown RBP29.3■■■□□ 2.28
SNF8-208ENST00000510195 NTPCRQ9BSD7 190 aaKnown RBP29.3■■■□□ 2.28
SNF8-208ENST00000510195 WDR6Q9NNW5 1121 aaKnown RBP29.3■■■□□ 2.28
SNF8-208ENST00000510195 KMT5AQ9NQR1 393 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 KCND2Q9NZV8 630 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 GDAQ9Y2T3 454 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 C2orf16Q68DN1 1984 aa29.3■■■□□ 2.28
SNF8-208ENST00000510195 PLXNA3P51805 1871 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 CD2BP2O95400 341 aaKnown RBP29.29■■■□□ 2.28
SNF8-208ENST00000510195 NUBP1P53384 320 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 PALB2Q86YC2 1186 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 PIK3R5Q8WYR1 880 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 RABGGTAQ92696 567 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 UROC1Q96N76 676 aa29.29■■■□□ 2.28
SNF8-208ENST00000510195 RUSC1Q9BVN2 902 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms