RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 KIAA2013Q8IYS2 634 aa11.55□□□□□ -0.56
DDX41-211ENST00000510171 PJA1Q8NG27 643 aa11.55□□□□□ -0.56
DDX41-211ENST00000510171 RMDN1Q96DB5 314 aa11.55□□□□□ -0.56
DDX41-211ENST00000510171 HINFPQ9BQA5 517 aa11.55□□□□□ -0.56
DDX41-211ENST00000510171 RPP25Q9BUL9 199 aaKnown RBP11.55□□□□□ -0.56
DDX41-211ENST00000510171 GJB4Q9NTQ9 266 aa11.55□□□□□ -0.56
DDX41-211ENST00000510171 SF3B1O75533 1304 aaKnown RBP eCLIP11.55□□□□□ -0.56
DDX41-211ENST00000510171 HNRNPA1P09651 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX41-211ENST00000510171 RARRES1P49788 294 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 TUSC3Q13454 348 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 SNW1Q13573 536 aaKnown RBP11.54□□□□□ -0.56
DDX41-211ENST00000510171 EARS2Q5JPH6 523 aaKnown RBP11.54□□□□□ -0.56
DDX41-211ENST00000510171 RTP2Q5QGT7 225 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 PPM1LQ5SGD2 360 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 FAM171A1Q5VUB5 890 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 DGLUCYQ7Z3D6 616 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 RUBCNQ92622 972 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 CCDC43Q96MW1 224 aaKnown RBP11.54□□□□□ -0.56
DDX41-211ENST00000510171 CLSTN3Q9BQT9 956 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 TTPALQ9BTX7 342 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 FOXQ1Q9C009 403 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
DDX41-211ENST00000510171 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 CACNG4Q9UBN1 327 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 ZMYM2Q9UBW7 1377 aa11.54□□□□□ -0.56
DDX41-211ENST00000510171 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
DDX41-211ENST00000510171 KANSL1LA0AUZ9 987 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 CASTOR2A6NHX0 329 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 LRRIQ4A6NIV6 560 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 XYLBO75191 536 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 THP07101 528 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 C8AP07357 584 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 XRCC6P12956 609 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX41-211ENST00000510171 GLULP15104 373 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 NTHL1P78549 312 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 PUM1Q14671 1186 aaKnown RBP eCLIP11.53□□□□□ -0.564e-10■□□□□ 9.2
DDX41-211ENST00000510171 CALCRLQ16602 461 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 SLC44A4Q53GD3 710 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 MTSS1LQ765P7 747 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 MAEAQ7L5Y9 396 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 LNX1Q8TBB1 728 aaPredicted RBP11.53□□□□□ -0.56
DDX41-211ENST00000510171 PIGOQ8TEQ8 1089 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 HASPINQ8TF76 798 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 WASF1Q92558 559 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 FGF13Q92913 245 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 FGF14Q92915 247 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 PAAF1Q9BRP4 392 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 BCO2Q9BYV7 579 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 TTC12Q9H892 705 aaPredicted RBP11.53□□□□□ -0.56
DDX41-211ENST00000510171 BRMS1Q9HCU9 246 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
DDX41-211ENST00000510171 ORC3Q9UBD5 711 aaPredicted RBP11.53□□□□□ -0.56
DDX41-211ENST00000510171 FBXW11Q9UKB1 542 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 POLIQ9UNA4 740 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 STK36Q9NRP7 1315 aa11.53□□□□□ -0.56
DDX41-211ENST00000510171 A0A087WWV3 80 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 FAM205CA6NFA0 338 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 POTEMA6NI47 508 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 FAM170BA6NMN3 283 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 CCL16O15467 120 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 EIF5BO60841 1220 aaKnown RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 DTNBO60941 627 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 LRRN2O75325 713 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 KIF4AO95239 1232 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 HOXA9P31269 272 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 KRT2P35908 639 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 TXKP42681 527 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 PFKPQ01813 784 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 PRKCQQ04759 706 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 ELAVL2Q12926 359 aaKnown RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 NR5A1Q13285 461 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 MLF2Q15773 248 aaPredicted RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 PSMD5Q16401 504 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 UVSSAQ2YD98 709 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 AXDND1Q5T1B0 1012 aaPredicted RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 PDXDC1Q6P996 788 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 ZBTB8OSQ8IWT0 167 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 MAML2Q8IZL2 1156 aaPredicted RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 FZD8Q9H461 694 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 SPATA6Q9NWH7 488 aaPredicted RBP11.52□□□□□ -0.57
DDX41-211ENST00000510171 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 FAM186AA6NE01 2351 aa11.52□□□□□ -0.57
DDX41-211ENST00000510171 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
DDX41-211ENST00000510171 N4BP3O15049 544 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 ADAM12O43184 909 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 LAMTOR5O43504 91 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 PFKFB2O60825 505 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 ANAPC15P60006 121 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 RAB33AQ14088 237 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
DDX41-211ENST00000510171 FAM187BQ17R55 369 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms