RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 ALKAL1Q6UXT8 129 aa13.35□□□□□ -0.27
CLDND1-218ENST00000508503 LRRC15Q8TF66 581 aa13.35□□□□□ -0.27
CLDND1-218ENST00000508503 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
CLDND1-218ENST00000508503 KMT5AQ9NQR1 393 aa13.35□□□□□ -0.27
CLDND1-218ENST00000508503 MRPL17Q9NRX2 175 aaKnown RBP13.35□□□□□ -0.27
CLDND1-218ENST00000508503 DZANK1Q9NVP4 752 aa13.35□□□□□ -0.27
CLDND1-218ENST00000508503 PRG3Q9Y2Y8 225 aaPredicted RBP13.35□□□□□ -0.27
CLDND1-218ENST00000508503 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 CCDC169A6NNP5 214 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 RECQL4O94761 1208 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 THP07101 528 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 PLS3P13797 630 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 UBA7P41226 1012 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 GRIN1Q05586 938 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 RESTQ13127 1097 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 SNX21Q969T3 373 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 NECTIN4Q96NY8 510 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 PLIN2Q99541 437 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 EMILIN2Q9BXX0 1053 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 BLOC1S4Q9NUP1 217 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 FNIP2Q9P278 1114 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 MYH11P35749 1972 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 WDFY4Q6ZS81 3184 aa13.34□□□□□ -0.27
CLDND1-218ENST00000508503 K7ELQ4 463 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 TEX28O15482 410 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 COL9A1P20849 921 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 KLRC2P26717 231 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 GRM5P41594 1212 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 MTHFRP42898 656 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 GLUD2P49448 558 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 DMP1Q13316 513 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 USP41Q3LFD5 358 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 CES5AQ6NT32 575 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 FUT10Q6P4F1 479 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 LILRA6Q6PI73 481 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 APBB1IPQ7Z5R6 666 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 HDAC7Q8WUI4 952 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 CDK5RAP3Q96JB5 506 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 FBXL18Q96ME1 805 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 PPP1R10Q96QC0 940 aaKnown RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 MRPL4Q9BYD3 311 aaKnown RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 CDT1Q9H211 546 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 SRPRBQ9Y5M8 271 aaKnown RBP13.33□□□□□ -0.28
CLDND1-218ENST00000508503 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
CLDND1-218ENST00000508503 MYO10Q9HD67 2058 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 VPS37CA5D8V6 355 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 PRR33A8MZF0 331 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 TMEM189-UBE2V1I3L0A0 370 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 SLC16A4O15374 487 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 URODP06132 367 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 MAPTP10636 758 aaKnown RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 MCF2P10911 925 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 LIG1P18858 919 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 SCP2P22307 547 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 DDIT3P35638 169 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 ZNF131P52739 623 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 SMTNP53814 917 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 ZRSR1Q15695 479 aaKnown RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 TMEM132AQ24JP5 1023 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 KIAA1841Q6NSI8 718 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 KANK3Q6NY19 840 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 CD300LGQ6UXG3 332 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 ZPBP2Q6X784 338 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 GPR149Q86SP6 731 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 C12orf76Q8N812 135 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 CEP120Q8N960 986 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 TMEM87AQ8NBN3 555 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 CMASQ8NFW8 434 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 EDAQ92838 391 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 RIPOR3Q96MK2 946 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 GDAQ9Y2T3 454 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 MTCL1Q9Y4B5 1905 aaKnown RBP13.32□□□□□ -0.28
CLDND1-218ENST00000508503 TECTAO75443 2155 aa13.32□□□□□ -0.28
CLDND1-218ENST00000508503 NPHP3-ACAD11A0A0J9YXS1 232 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 SMIM28A0A1B0GU29 152 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 TADA2AO75478 443 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 TOM1L1O75674 476 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLDND1-218ENST00000508503 ADH1AP07327 375 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 KCNE1P15382 129 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 CA8P35219 290 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 ATAT1Q5SQI0 421 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 DCLRE1AQ6PJP8 1040 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 MPZL3Q6UWV2 235 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 CYP26C1Q6V0L0 522 aa13.31□□□□□ -0.28
CLDND1-218ENST00000508503 C15orf39Q6ZRI6 1047 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms