RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SCOCQ9UIL1 159 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 TESMINQ9Y4I5 508 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 INSRRP14616 1297 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 VCAM1P19320 739 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 SREBF1P36956 1147 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 PPP3CAQ08209 521 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 SP140Q13342 867 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 PUM1Q14671 1186 aaKnown RBP eCLIP6.72□□□□□ -1.33
GYPA-205ENST00000508337 RRP1BQ14684 758 aaKnown RBP6.72□□□□□ -1.33
GYPA-205ENST00000508337 GADL1Q6ZQY3 521 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 Q6ZRM9 215 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 TMX3Q96JJ7 454 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 MNTQ99583 582 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 REXO4Q9GZR2 422 aaKnown RBP6.72□□□□□ -1.33
GYPA-205ENST00000508337 ENKD1Q9H0I2 346 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 IP6K2Q9UHH9 426 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 TUBD1Q9UJT1 453 aa6.72□□□□□ -1.33
GYPA-205ENST00000508337 RUVBL1Q9Y265 456 aaKnown RBP6.72□□□□□ -1.33
GYPA-205ENST00000508337 E2F8A0AVK6 867 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 PCDHGA12O60330 932 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
GYPA-205ENST00000508337 TTF1Q15361 905 aaPredicted RBP6.71□□□□□ -1.34
GYPA-205ENST00000508337 FAM47AQ5JRC9 791 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 ATXN7L2Q5T6C5 722 aaPredicted RBP6.71□□□□□ -1.34
GYPA-205ENST00000508337 AFMIDQ63HM1 303 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 RNF207Q6ZRF8 634 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 Q6ZSN1 163 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 Q6ZVL8 140 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 ZNF572Q7Z3I7 529 aaPredicted RBP6.71□□□□□ -1.34
GYPA-205ENST00000508337 RNF169Q8NCN4 708 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 OR10H5Q8NGA6 315 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.71□□□□□ -1.34
GYPA-205ENST00000508337 HOOK2Q96ED9 719 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 CEP95Q96GE4 821 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 PLEKHG4BQ96PX9 1271 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 PCDHGA9Q9Y5G4 932 aaKnown RBP6.71□□□□□ -1.34
GYPA-205ENST00000508337 PCDHGA8Q9Y5G5 932 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 PCDHGA7Q9Y5G6 932 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 PCDHGA6Q9Y5G7 932 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 PCDHGA3Q9Y5H0 932 aa6.71□□□□□ -1.34
GYPA-205ENST00000508337 CCDC154A6NI56 674 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 SPATA31D3P0C874 917 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 SCNN1GP51170 649 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 CLRN1P58418 232 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 MXRA7P84157 204 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 VPS72Q15906 364 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 ZXDCQ2QGD7 858 aaPredicted RBP6.7□□□□□ -1.34
GYPA-205ENST00000508337 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
GYPA-205ENST00000508337 SPATA31D4Q6ZUB0 917 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 DRC7Q8IY82 874 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 LILRA3Q8N6C8 439 aaPredicted RBP6.7□□□□□ -1.34
GYPA-205ENST00000508337 STON2Q8WXE9 905 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 HSPBAP1Q96EW2 488 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 TCEAL9Q9UHQ7 104 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 SORCS3Q9UPU3 1222 aa6.7□□□□□ -1.34
GYPA-205ENST00000508337 REXO2Q9Y3B8 237 aaKnown RBP6.7□□□□□ -1.34
GYPA-205ENST00000508337 CXorf49A8MYA2 514 aaPredicted RBP6.69□□□□□ -1.34
GYPA-205ENST00000508337 PJA2O43164 708 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 SCAF4O95104 1147 aaKnown RBP6.69□□□□□ -1.34
GYPA-205ENST00000508337 ALAS1P13196 640 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 ALDH1A3P47895 512 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 EPHB1P54762 984 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 PIN1Q13526 163 aaPredicted RBP6.69□□□□□ -1.34
GYPA-205ENST00000508337 SEPT2Q15019 361 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 R3HDM1Q15032 1099 aaKnown RBP6.69□□□□□ -1.34
GYPA-205ENST00000508337 CCDC157Q569K6 752 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 MFSD14BQ5SR56 506 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 TMEM240Q5SV17 173 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 DBX2Q6ZNG2 339 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 SPRED1Q7Z699 444 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 SYNE4Q8N205 404 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 CPT1CQ8TCG5 803 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 CASKIN2Q8WXE0 1202 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 EXTL1Q92935 676 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 RAB24Q969Q5 203 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 MRI1Q9BV20 369 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 VPS11Q9H270 941 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 MAN1C1Q9NR34 630 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 MYRFQ9Y2G1 1151 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 PCDHA13Q9Y5I0 950 aa6.69□□□□□ -1.34
GYPA-205ENST00000508337 MYBBP1AQ9BQG0 1328 aaKnown RBP6.69□□□□□ -1.34
GYPA-205ENST00000508337 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 TBKBP1A7MCY6 615 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 FZD9O00144 591 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 KIAA0391O15091 583 aaKnown RBP6.68□□□□□ -1.34
GYPA-205ENST00000508337 PF4V1P10720 104 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 DDCP20711 480 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 CDC42EP1Q00587 391 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 METTL24Q5JXM2 366 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 OR52N2Q8NGI0 321 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 HOXB13Q92826 284 aaPredicted RBP6.68□□□□□ -1.34
GYPA-205ENST00000508337 LSM14BQ9BX40 385 aaKnown RBP6.68□□□□□ -1.34
GYPA-205ENST00000508337 CPEB1Q9BZB8 566 aaKnown RBP6.68□□□□□ -1.34
GYPA-205ENST00000508337 ZNF180Q9UJW8 692 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 ACTL7AQ9Y615 435 aa6.68□□□□□ -1.34
GYPA-205ENST00000508337 CFAP20Q9Y6A4 193 aaKnown RBP6.68□□□□□ -1.34
GYPA-205ENST00000508337 HTRA2O43464 458 aaPredicted RBP6.67□□□□□ -1.34
GYPA-205ENST00000508337 FAM20BO75063 409 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 POMCP01189 267 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms