RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 COL25A1Q9BXS0 654 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-211ENST00000507689 EMILIN2Q9BXX0 1053 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 MRPL17Q9NRX2 175 aaKnown RBP17.13■□□□□ 0.33
COL1A1-211ENST00000507689 SEL1LQ9UBV2 794 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 TRANK1O15050 2925 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 CDH23Q9H251 3354 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 TTLL13PA6NNM8 815 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
COL1A1-211ENST00000507689 PER2O15055 1255 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 CTSAP10619 480 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 IDEP14735 1019 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 GRM5P41594 1212 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 AFF1P51825 1210 aaKnown RBP17.12■□□□□ 0.33
COL1A1-211ENST00000507689 NCKAP1LP55160 1127 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 OSTNP61366 133 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 KRT85P78386 507 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 ADAM15Q13444 863 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 TUSC3Q13454 348 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL1A1-211ENST00000507689 DUSP6Q16828 381 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 ELMSAN1Q6PJG2 1045 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 DDX12PQ92771 950 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
COL1A1-211ENST00000507689 BMP1P13497 986 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 ZNF131P52739 623 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
COL1A1-211ENST00000507689 DSC1Q08554 894 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 PPFIBP1Q86W92 1011 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 CASP10Q92851 521 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 ZBP1Q9H171 429 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 CDT1Q9H211 546 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
COL1A1-211ENST00000507689 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
COL1A1-211ENST00000507689 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 C2orf71A6NGG8 1288 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL1A1-211ENST00000507689 ELAVL2Q12926 359 aaKnown RBP17.1■□□□□ 0.33
COL1A1-211ENST00000507689 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-211ENST00000507689 COL19A1Q14993 1142 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 CLUL1Q15846 466 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 LLGL2Q6P1M3 1020 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-211ENST00000507689 DHX58Q96C10 678 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 UROC1Q96N76 676 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 MAGEF1Q9HAY2 307 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 DPP7Q9UHL4 492 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
COL1A1-211ENST00000507689 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-211ENST00000507689 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL1A1-211ENST00000507689 CASTOR2A6NHX0 329 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 HIDE1A8MVS5 230 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 LINC01565O15544 149 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 SOD2P04179 222 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 EDN1P05305 212 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 KLRC2P26717 231 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 GLUD2P49448 558 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 CREMQ03060 361 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 SMAD4Q13485 552 aaKnown RBP17.09■□□□□ 0.33
COL1A1-211ENST00000507689 ALCAMQ13740 583 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 PKP1Q13835 747 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 TPRNQ4KMQ1 711 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-211ENST00000507689 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 HVCN1Q96D96 273 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 POP1Q99575 1024 aaKnown RBP17.09■□□□□ 0.33
COL1A1-211ENST00000507689 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 PCDHB13Q9Y5F0 798 aa17.09■□□□□ 0.33
COL1A1-211ENST00000507689 GRXCR2A6NFK2 248 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 MYMKA6NI61 221 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 TNFRSF10AO00220 468 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 C2CD2LO14523 706 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 TRAPPC3O43617 180 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 BRD1O95696 1058 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 HOXB8P17481 243 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-211ENST00000507689 PROZP22891 400 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 SSTR3P32745 418 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-211ENST00000507689 MCL1Q07820 350 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 USP41Q3LFD5 358 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 CES5AQ6NT32 575 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 SFR1Q86XK3 245 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-211ENST00000507689 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
COL1A1-211ENST00000507689 SCAND2PQ9GZW5 306 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-211ENST00000507689 PANK4Q9NVE7 773 aa17.08■□□□□ 0.32
COL1A1-211ENST00000507689 DZANK1Q9NVP4 752 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms