RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 GAD1Q99259 594 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 NXF3Q9H4D5 531 aaKnown RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 ENTPD7Q9NQZ7 604 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 PANK4Q9NVE7 773 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 ANKFY1Q9P2R3 1169 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 GBF1Q92538 1859 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 UBE4BO95155 1302 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 FRMD3A2A2Y4 597 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 EPOPA6NHQ4 379 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 GRM6O15303 877 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 EIF3DO15371 548 aaKnown RBP eCLIP8.52□□□□□ -1.05
SKP2-203ENST00000504386 RECQL4O94761 1208 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 GCNT3O95395 438 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 LDHAP00338 332 aaKnown RBP8.52□□□□□ -1.05
SKP2-203ENST00000504386 GALTP07902 379 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 LINC00271P0C7V0 271 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 PROZP22891 400 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 GATMP50440 423 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 MRPS5P82675 430 aaKnown RBP8.52□□□□□ -1.05
SKP2-203ENST00000504386 MCL1Q07820 350 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 DSC1Q08554 894 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 E2F4Q16254 413 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 NT5DC1Q5TFE4 455 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 KIAA1841Q6NSI8 718 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 ZNF720Q7Z2F6 126 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 TMC7Q7Z402 723 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 SFR1Q86XK3 245 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.52□□□□□ -1.05
SKP2-203ENST00000504386 SYCP3Q8IZU3 236 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 GOLGA5Q8TBA6 731 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 IGSF21Q96ID5 467 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 C7orf25Q9BPX7 421 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 TARS2Q9BW92 718 aaKnown RBP8.52□□□□□ -1.05
SKP2-203ENST00000504386 EMILIN2Q9BXX0 1053 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 PANK2Q9BZ23 570 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 TRIM9Q9C026 710 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 GBP3Q9H0R5 595 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 CDT1Q9H211 546 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 NRDE2Q9H7Z3 1164 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 PTPRHQ9HD43 1115 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.52□□□□□ -1.05
SKP2-203ENST00000504386 CHMP5Q9NZZ3 219 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 CGNQ9P2M7 1197 aaKnown RBP8.52□□□□□ -1.05
SKP2-203ENST00000504386 HES2Q9Y543 173 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 IRAK3Q9Y616 596 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 PTPRSQ13332 1948 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 DNAH12Q6ZR08 3092 aa8.52□□□□□ -1.05
SKP2-203ENST00000504386 SF3B1O75533 1304 aaKnown RBP eCLIP8.52□□□□□ -1.051e-6■■■■■ 67.1
SKP2-203ENST00000504386 NPHP3-ACAD11A0A0J9YXS1 232 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 MYMKA6NI61 221 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 RFXAPO00287 272 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 OGTO15294 1046 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 C1RP00736 705 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 POMCP01189 267 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 URODP06132 367 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 PFKFB1P16118 471 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 AKAP5P24588 427 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 RPL9P32969 192 aaKnown RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 OR1G1P47890 313 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 SCNN1GP51170 649 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 NUBP1P53384 320 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 PPP2R3AQ06190 1150 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 PSMD2Q13200 908 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 CCDC85BQ15834 202 aaPredicted RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 LONRF3Q496Y0 759 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 L1TD1Q5T7N2 865 aaKnown RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 LRRC55Q6ZSA7 311 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 UNC13DQ70J99 1090 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 HS2ST1Q7LGA3 356 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 COLGALT2Q8IYK4 626 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 PPM1EQ8WY54 764 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 DNAJC19Q96DA6 116 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 TCF25Q9BQ70 676 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 MSTO1Q9BUK6 570 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 TLE6Q9H808 572 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 RPF1Q9H9Y2 349 aaKnown RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 KIAA1586Q9HCI6 787 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 ALG13Q9NP73 1137 aaKnown RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
SKP2-203ENST00000504386 EXOC1Q9NV70 894 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 SNTG2Q9NY99 539 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 GDAQ9Y2T3 454 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 DERAQ9Y315 318 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 ZDHHC9Q9Y397 364 aa8.51□□□□□ -1.05
SKP2-203ENST00000504386 MYH15Q9Y2K3 1946 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 A0A0B4J269 797 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 FAM237AA0A1B0GTK4 181 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 TMEM189-UBE2V1I3L0A0 370 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 NRP1O14786 923 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 FSCN2O14926 492 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 TADA2AO75478 443 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 IL18RAPO95256 599 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 SOD2P04179 222 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 ADH1AP07327 375 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 CTSAP10619 480 aa8.5□□□□□ -1.05
SKP2-203ENST00000504386 HARSP12081 509 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms