RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 NT5C1AQ9BXI3 368 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TSPAN10Q9H1Z9 355 aaPredicted RBP9.66□□□□□ -0.86
FN1-227ENST00000498719 PLEKHA4Q9H4M7 779 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 DNAJC18Q9H819 358 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 PSD3Q9NYI0 1048 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 PPP1R9AQ9ULJ8 1098 aa9.66□□□□□ -0.86
FN1-227ENST00000498719 TARSL2A2RTX5 802 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 LCA5LO95447 670 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 HOXA10P31260 410 aaPredicted RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 GGCXP38435 758 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 ALDH5A1P51649 535 aaPredicted RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 MRPL12P52815 198 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 HSD17B7P56937 341 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 POLR2FP61218 127 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 FKBP3Q00688 224 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 ABCB5Q2M3G0 1257 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 SLC6A19Q695T7 634 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 POTEGQ6S5H5 508 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 POTEEQ6S8J3 1075 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 SPATA4Q8NEY3 305 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 ATP6V1E2Q96A05 226 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 RPGRIP1Q96KN7 1286 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 PHF12Q96QT6 1004 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 TSG101Q99816 390 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 RSRP1Q9BUV0 290 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 BCAS3Q9H6U6 928 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 LCMT1Q9UIC8 334 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 PCDHA2Q9Y5H9 948 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 AGPSO00116 658 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 MED24O75448 989 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 PRPF6O94906 941 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 FGFR1OPO95684 399 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 PLA2G4BP0C869 781 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 ACTN2P35609 894 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 CASP5P51878 434 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 NAP1L1P55209 391 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 PSMC6P62333 389 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 MPP1Q00013 466 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 QRICH1Q2TAL8 776 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 HERC4Q5GLZ8 1057 aaPredicted RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 APOBEC3HQ6NTF7 200 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 GPBP1Q86WP2 473 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 DNAAF5Q86Y56 855 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 LSMEM1Q8N8F7 131 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 SCFD1Q8WVM8 642 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 TBATAQ96M53 351 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 IWS1Q96ST2 819 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 LSM14BQ9BX40 385 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 TLR10Q9BXR5 811 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 RANBP17Q9H2T7 1088 aaKnown RBP9.65□□□□□ -0.86
FN1-227ENST00000498719 AAASQ9NRG9 546 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 DCAF16Q9NXF7 216 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 GIMAP2Q9UG22 337 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 PCDHA1Q9Y5I3 950 aa9.65□□□□□ -0.86
FN1-227ENST00000498719 ABCB11O95342 1321 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 MEIS1O00470 390 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 CHKAP35790 457 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 GJA9P57773 515 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 MINDY4Q4G0A6 757 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 SLC45A4Q5BKX6 768 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 MUM1L1Q5H9M0 696 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 KLHDC7AQ5VTJ3 777 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 FOXB2Q5VYV0 432 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 NAXEQ8NCW5 288 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 ZSWIM2Q8NEG5 633 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 SLC7A3Q8WY07 619 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 TNIP3Q96KP6 325 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 CRAMP1Q96RY5 1269 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 ZC3H12CQ9C0D7 883 aaKnown RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 COA1Q9GZY4 146 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 MED4Q9NPJ6 270 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 XPO7Q9UIA9 1087 aaKnown RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 PACSIN2Q9UNF0 486 aaPredicted RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 GREB1LQ9C091 1923 aaPredicted RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 ANKRD31Q8N7Z5 1873 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 PF4V1P10720 104 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 EEF2P13639 858 aaKnown RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 CYP11B2P19099 503 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 AARSP49588 968 aaKnown RBP eCLIP9.64□□□□□ -0.87
FN1-227ENST00000498719 NRLP54845 237 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 ZKSCAN8Q15776 578 aaPredicted RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 KCTD19Q17RG1 926 aaPredicted RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 C7orf61Q8IZ16 206 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 GOLGA5Q8TBA6 731 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 PACSIN1Q9BY11 444 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 KCTD10Q9H3F6 313 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 VIPAS39Q9H9C1 493 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 RBM12Q9NTZ6 932 aaKnown RBP9.64□□□□□ -0.87
FN1-227ENST00000498719 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
FN1-227ENST00000498719 DDTLA6NHG4 134 aaPredicted RBP9.63□□□□□ -0.87
FN1-227ENST00000498719 H0Y3Z8 333 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms