RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 KIAA1211LQ6NV74 962 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 LRFN4Q6PJG9 635 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 TAX1BP1Q86VP1 789 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 ZNF713Q8N859 430 aaPredicted RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 MIGA1Q8NAN2 632 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 MAGEC3Q8TD91 643 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 STAMQ92783 540 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CNOT6LQ96LI5 555 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 CAPS2Q9BXY5 557 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 AIPL1Q9NZN9 384 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 LRP2BPQ9P2M1 347 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 STK17AQ9UEE5 414 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 NAGPAQ9UK23 515 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 MINPP1Q9UNW1 487 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PCDHGC5Q9Y5F6 944 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PCDHA2Q9Y5H9 948 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 DUSP10Q9Y6W6 482 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 BAZ2AQ9UIF9 1905 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 SLC22A31A6NKX4 558 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 H3BRJ5 948 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 SNAP23O00161 211 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 NKRFO15226 690 aaKnown RBP eCLIP4.28□□□□□ -1.72
CLTC-209ENST00000498711 USO1O60763 962 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 COBLO75128 1261 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CYP11A1P05108 521 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PAEPP09466 180 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 YY1P25490 414 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 ANXA13P27216 316 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 MCM7P33993 719 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 SLC7A5Q01650 507 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 LRRC63Q05C16 580 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 C2orf54Q08AI8 447 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 DRP2Q13474 957 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 HDAC7Q8WUI4 952 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KLHL6Q8WZ60 621 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KAT2BQ92831 832 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 INPP4AQ96PE3 977 aaPredicted RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 CORO1BQ9BR76 489 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PLCB1Q9NQ66 1216 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KRT82Q9NSB4 513 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 FRRS1LQ9P0K9 344 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 LRWD1Q9UFC0 647 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PCDHB10Q9UN67 800 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 TFR2Q9UP52 801 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 STXBP5LQ9Y2K9 1186 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CAPN6Q9Y6Q1 641 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PLIN4Q96Q06 1357 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CCDC88AQ3V6T2 1871 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CYP2D7A0A087X1C5 515 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 GOLGA6CA6NDK9 693 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 GOLGA6BA6NDN3 693 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 POLRMTO00411 1230 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 SOX1O00570 391 aaPredicted RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 EPHB6O15197 1021 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 TLR2O60603 784 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 FGFR1OPO95684 399 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 OR52Z1P0C646 297 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 GOLGA6DP0CG33 693 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 PLCG1P19174 1290 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 ECHS1P30084 290 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KIF11P52732 1056 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 NFKB2Q00653 900 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 MECOMQ03112 1051 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 INPP5AQ14642 412 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CBX2Q14781 532 aaPredicted RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 LACTB2Q53H82 288 aaPredicted RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 TMEM201Q5SNT2 666 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 C10orf76Q5T2E6 689 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KCNV1Q6PIU1 500 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 B4GALNT4Q76KP1 1039 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 SLFN11Q7Z7L1 901 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 KIAA1328Q86T90 577 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 RNF180Q86T96 592 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CABP7Q86V35 215 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CACTIN-AS1Q8N1I8 211 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 RASGEF1CQ8N431 466 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CSGALNACT2Q8N6G5 542 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 OLIG1Q8TAK6 271 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 WHAMMQ8TF30 809 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 RIN2Q8WYP3 895 aaPredicted RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 ELMO3Q96BJ8 720 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 ARL8AQ96BM9 186 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 SLC9A7Q96T83 725 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 LPIN3Q9BQK8 851 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 TACO1Q9BSH4 297 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 TXLNGYQ9BZA5 131 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CRNKL1Q9BZJ0 848 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 ZC3H12CQ9C0D7 883 aaKnown RBP4.28□□□□□ -1.72
CLTC-209ENST00000498711 NDST4Q9H3R1 872 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 RIOX1Q9H6W3 641 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 TMBIM4Q9HC24 238 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 GOLGA6AQ9NYA3 693 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 MAPRE3Q9UPY8 281 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 FAM169AQ9Y6X4 670 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 FOCADQ5VW36 1801 aa4.28□□□□□ -1.72
CLTC-209ENST00000498711 CDK5RAP2Q96SN8 1893 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms