RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	EP400NL	Q6ZTU2	488 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	USP49	Q70CQ1	688 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	HAUS6	Q7Z4H7	955 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	FAM178B	Q8IXR5	827 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	VPS52	Q8N1B4	723 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	MRPL43	Q8N983	215 aa	Known RBP	11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	KIF12	Q96FN5	646 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	ZFP42	Q96MM3	310 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	TARS2	Q9BW92	718 aa	Known RBP	11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	ZHX3	Q9H4I2	956 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	IGFLR1	Q9H665	355 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	PTPRH	Q9HD43	1115 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	SNTG2	Q9NY99	539 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	SEL1L	Q9UBV2	794 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	DNAJB4	Q9UDY4	337 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	IRAK3	Q9Y616	596 aa		11.53	□□□□□ -0.56
FXR1-222	ENST00000498658	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	TTLL13P	A6NNM8	815 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658		K7ENM7	598 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	CLDN3	O15551	220 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	RECQL4	O94761	1208 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	CXCL14	O95715	111 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	CTSA	P10619	480 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	GAP43	P17677	238 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	GRM5	P41594	1212 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	ME1	P48163	572 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	NDUFV1	P49821	464 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	TUSC3	Q13454	348 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	PLPP4	Q5VZY2	271 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	EEF1DP3	Q658K8	133 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	IQUB	Q8NA54	791 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	GSTCD	Q8NEC7	633 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	DDX12P	Q92771	950 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	BICD1	Q96G01	975 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	ZBP1	Q9H171	429 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	ST6GALNAC4	Q9H4F1	302 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	MAGEF1	Q9HAY2	307 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	SLC38A7	Q9NVC3	462 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	FAM13B	Q9NYF5	915 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	KLK14	Q9P0G3	267 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	TBX20	Q9UMR3	447 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	GDA	Q9Y2T3	454 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	BRWD1	Q9NSI6	2320 aa		11.52	□□□□□ -0.57
FXR1-222	ENST00000498658	ATG2A	Q2TAZ0	1938 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	C2orf71	A6NGG8	1288 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	HNRNPDL	O14979	420 aa	Known RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	SOD2	P04179	222 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	EDN1	P05305	212 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	PROZ	P22891	400 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	CA8	P35219	290 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	LIG4	P49917	911 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	KRT85	P78386	507 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	TMEM184A	Q6ZMB5	413 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	TAS1R3	Q7RTX0	852 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	ADGRD2	Q7Z7M1	963 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	RBM23	Q86U06	439 aa	Known RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	PPFIBP1	Q86W92	1011 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	TMEM173	Q86WV6	379 aa	Predicted RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	GPR65	Q8IYL9	337 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	ADAMTS19	Q8TE59	1207 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	LRRC15	Q8TF66	581 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	HVCN1	Q96D96	273 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	UROC1	Q96N76	676 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	ACAP3	Q96P50	834 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	UHRF1	Q96T88	793 aa	Predicted RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	EMILIN2	Q9BXX0	1053 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	CDT1	Q9H211	546 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	TNMD	Q9H2S6	317 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	MRPL17	Q9NRX2	175 aa	Known RBP	11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	MIOS	Q9NXC5	875 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	RCOR1	Q9UKL0	485 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	USP20	Q9Y2K6	914 aa		11.51	□□□□□ -0.57
FXR1-222	ENST00000498658	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658		H3BQ06	376 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	RIOK3	O14730	519 aa	Known RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PER2	O15055	1255 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	TADA2A	O75478	443 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PIGR	P01833	764 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	UROD	P06132	367 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	HOXB8	P17481	243 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	LTBR	P36941	435 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	MATR3	P43243	847 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	KCNQ1	P51787	676 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	GTF2B	Q00403	316 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	CREM	Q03060	361 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	DNM1	Q05193	864 aa	Known RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	MCL1	Q07820	350 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	ELAVL2	Q12926	359 aa	Known RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	COASY	Q13057	564 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	ALCAM	Q13740	583 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	PKP1	Q13835	747 aa		11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.5	□□□□□ -0.57
FXR1-222	ENST00000498658	XKR4	Q5GH76	650 aa		11.5	□□□□□ -0.57

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