RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 INTS8Q75QN2 995 aaKnown RBP21.5■■□□□ 1.03
SCAMP3-209ENST00000497470 ACAP3Q96P50 834 aa21.5■■□□□ 1.03
SCAMP3-209ENST00000497470 MTIF3Q9H2K0 278 aaKnown RBP21.5■■□□□ 1.03
SCAMP3-209ENST00000497470 DERAQ9Y315 318 aa21.5■■□□□ 1.03
SCAMP3-209ENST00000497470 IPPQ9Y573 584 aa21.5■■□□□ 1.03
SCAMP3-209ENST00000497470 TET1Q8NFU7 2136 aa21.5■■□□□ 1.03
SCAMP3-209ENST00000497470 TRIM49BA6NDI0 452 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 LRRC10BA6NIK2 292 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 CLIC2O15247 247 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 NPTXRO95502 500 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 EPB41P11171 864 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 EEF1GP26641 437 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 MATR3P43243 847 aaKnown RBP eCLIP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 CLDN10P78369 228 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 SNRNP35Q16560 246 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 TPD52L1Q16890 204 aaPredicted RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 DEFB128Q7Z7B8 93 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 NPAS4Q8IUM7 802 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 BRSK2Q8IWQ3 736 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 SMG8Q8ND04 991 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 PHOSPHO2Q8TCD6 241 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 LINC01599Q8WXQ3 324 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 HERVK_113Q902F9 699 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 BORCS6Q96GS4 357 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 SRRTQ9BXP5 876 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 EIF2AQ9BY44 585 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 NFE2L3Q9Y4A8 694 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 TTC3P53804 2025 aa21.49■■□□□ 1.03
SCAMP3-209ENST00000497470 SCN5AQ14524 2016 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 BECN2A8MW95 431 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 TISP43B9A030 160 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 AKAP3O75969 853 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 AP3M2P53677 418 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 YARSP54577 528 aaKnown RBP21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 STX17P56962 302 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 TPM4P67936 248 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 PSMD6Q15008 389 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 TMEM240Q5SV17 173 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 CDKAL1Q5VV42 579 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 ALKAL1Q6UXT8 129 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 C16orf59Q7L2K0 433 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 DHX40Q8IX18 779 aaKnown RBP21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 IKZF4Q9H2S9 585 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 RPF1Q9H9Y2 349 aaKnown RBP21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 CBX8Q9HC52 389 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 USP20Q9Y2K6 914 aa21.48■■□□□ 1.03
SCAMP3-209ENST00000497470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 TTC26A0AVF1 554 aa21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 CARNS1A5YM72 827 aa21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 ITGA4P13612 1032 aa21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 ZNF18P17022 549 aa21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 CYP2J2P51589 502 aa21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 RASIP1Q5U651 963 aa21.47■■□□□ 1.03
SCAMP3-209ENST00000497470 PMM2O15305 246 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 AMHP03971 560 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 KCNE1P15382 129 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 ATF7P17544 494 aaPredicted RBP21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 GTF2H1P32780 548 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 BMP8BP34820 402 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 ZBTB33Q86T24 672 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 IRF2BP1Q8IU81 584 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 FAM186BQ8IYM0 893 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 THNSL1Q8IYQ7 743 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 TOP1MTQ969P6 601 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 FAM213AQ9BRX8 229 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 PCIF1Q9H4Z3 704 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 CNTN3Q9P232 1028 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 KANSL3Q9P2N6 904 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 ARMCX3Q9UH62 379 aaPredicted RBP21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 ZMYND8Q9ULU4 1186 aaPredicted RBP21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 C2CD2Q9Y426 696 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 PCDHB7Q9Y5E2 793 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 MICAL3Q7RTP6 2002 aa21.46■■□□□ 1.03
SCAMP3-209ENST00000497470 STX10O60499 249 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 KRT13P13646 458 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 CYP24A1Q07973 514 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 ENOX2Q16206 610 aaKnown RBP21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 SLC10A6Q3KNW5 377 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 CEP135Q66GS9 1140 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 SMYD5Q6GMV2 418 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 AGMOQ6ZNB7 445 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 CDR2LQ86X02 465 aaPredicted RBP21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 TRIM59Q8IWR1 403 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 AOPEPQ8N6M6 819 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 ANKRD20A12PQ8NF67 263 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 PARD3BQ8TEW8 1205 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 SNX27Q96L92 541 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 GDF15Q99988 308 aa21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 NXF3Q9H4D5 531 aaKnown RBP21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 RBAKQ9NYW8 714 aaPredicted RBP21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 MAGEC2Q9UBF1 373 aaPredicted RBP21.45■■□□□ 1.02
SCAMP3-209ENST00000497470 GOLGA6L19H0YKK7 550 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 RECQL4O94761 1208 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 SYN1P17600 705 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 CASP4P49662 377 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 ACOT2P49753 483 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 WDR5P61964 334 aaKnown RBP21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 BFSP1Q12934 665 aa21.44■■□□□ 1.02
SCAMP3-209ENST00000497470 TCTN1Q2MV58 587 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms