RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PTPRHQ9HD43 1115 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PCDHA13Q9Y5I0 950 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 BZW2Q9Y6E2 419 aaKnown RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 HAS3O00219 553 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 RIOK3O14730 519 aaKnown RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 KIF5CO60282 957 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 CYBAP13498 195 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 SOX5P35711 763 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 MAP2K2P36507 400 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 GPC3P51654 580 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 VAV2P52735 878 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PTK2Q05397 1052 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 MFSD10Q14728 455 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 ATF7IP2Q5U623 682 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 MFSD14CQ5VZR4 134 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 NFRKBQ6P4R8 1299 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 C15orf39Q6ZRI6 1047 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 FBXL13Q8NEE6 735 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 TAS1R2Q8TE23 839 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PPP1R13LQ8WUF5 828 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 FNBP1Q96RU3 617 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 MAP7D2Q96T17 732 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 LACRTQ9GZZ8 138 aa17.74■□□□□ 0.43
HLA-A-208ENST00000496081 UBE2TQ9NPD8 197 aaPredicted RBP17.74■□□□□ 0.43
HLA-A-208ENST00000496081 PTPRJQ12913 1337 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 CNTNAP2Q9UHC6 1331 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
HLA-A-208ENST00000496081 CSDE1O75534 798 aaKnown RBP17.73■□□□□ 0.43
HLA-A-208ENST00000496081 GFPT2O94808 682 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 MYL3P08590 195 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 FERP16591 822 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 TNFSF9P41273 254 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 SP3Q02447 781 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 AMHR2Q16671 573 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 FAM187BQ17R55 369 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 ARHGAP44Q17R89 818 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 CCDC122Q5T0U0 273 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 LMBRD2Q68DH5 695 aaPredicted RBP17.73■□□□□ 0.43
HLA-A-208ENST00000496081 MPZL3Q6UWV2 235 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 ZNF571Q7Z3V5 609 aaPredicted RBP17.73■□□□□ 0.43
HLA-A-208ENST00000496081 FAM84AQ96KN4 292 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 PRMT7Q9NVM4 692 aaPredicted RBP17.73■□□□□ 0.43
HLA-A-208ENST00000496081 RAB20Q9NX57 234 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 GUCA1BQ9UMX6 200 aa17.73■□□□□ 0.43
HLA-A-208ENST00000496081 OGTO15294 1046 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 EVI5O60447 810 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 TNNI1P19237 187 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 PSEN2P49810 448 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 SLC18A3Q16572 532 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 FSCN1Q16658 493 aaKnown RBP17.72■□□□□ 0.43
HLA-A-208ENST00000496081 EEF1DP3Q658K8 133 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 ADAMTS1Q9UHI8 967 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 TNFSF13BQ9Y275 285 aa17.72■□□□□ 0.43
HLA-A-208ENST00000496081 A0A087X0T9 212 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 FOXN3O00409 490 aaPredicted RBP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 KRT86O43790 486 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 C4BPAP04003 597 aaKnown RBP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 FAM228BP0C875 321 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 CASQ1P31415 396 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 MAGEA1P43355 309 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 HIC1Q14526 733 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 ZACNQ401N2 412 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 ZNF569Q5MCW4 686 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 CDR2LQ86X02 465 aaPredicted RBP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 BRSK2Q8IWQ3 736 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 NLRP7Q8WX94 980 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 ZEB2O60315 1214 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 ADAM17P78536 824 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 PURAQ00577 322 aaKnown RBP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 KIF5AQ12840 1032 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 TRIM32Q13049 653 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 TMEM132AQ24JP5 1023 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 ZNF568Q3ZCX4 644 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 ZNF410Q86VK4 478 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 MYRIPQ8NFW9 859 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 KAT5Q92993 513 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 VTI1AQ96AJ9 217 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 CGRRF1Q99675 332 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 MYO1AQ9UBC5 1043 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 CPSF3Q9UKF6 684 aaKnown RBP17.71■□□□□ 0.43
HLA-A-208ENST00000496081 DUSP10Q9Y6W6 482 aa17.71■□□□□ 0.43
HLA-A-208ENST00000496081 CASP8AP2Q9UKL3 1982 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 MYADML2A6NDP7 307 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 KIF22Q14807 665 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 TDRD10Q5VZ19 366 aaKnown RBP17.7■□□□□ 0.42
HLA-A-208ENST00000496081 FMNL3Q8IVF7 1028 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 SLC35F6Q8N357 371 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 PPM1KQ8N3J5 372 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 HELQQ8TDG4 1101 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 KREMEN1Q96MU8 473 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 CFHR5Q9BXR6 569 aa17.7■□□□□ 0.42
HLA-A-208ENST00000496081 CDT1Q9H211 546 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms