RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 NT5C3AQ9H0P0 336 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 TMEM134Q9H6X4 195 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 SFXN1Q9H9B4 322 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 C17orf75Q9HAS0 396 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 CDH22Q9UJ99 828 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 ADAM28Q9UKQ2 775 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 VWA3AA6NCI4 1184 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 TMEM221A6NGB7 291 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 F8W810 466 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 M0R296 226 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 TEX28O15482 410 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 RECQL4O94761 1208 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 C1RP00736 705 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.17
PTPRF-214ENST00000496043 PLA2G5P39877 138 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 NPTX2P47972 431 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 DMP1Q13316 513 aaPredicted RBP14.02□□□□□ -0.17
PTPRF-214ENST00000496043 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.17
PTPRF-214ENST00000496043 HYIQ5T013 277 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 HFE2Q6ZVN8 426 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 GPR149Q86SP6 731 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 HDAC7Q8WUI4 952 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 RABGGTAQ92696 567 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 PBXIP1Q96AQ6 731 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 CDK5RAP3Q96JB5 506 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 NTPCRQ9BSD7 190 aaKnown RBP14.02□□□□□ -0.17
PTPRF-214ENST00000496043 KMT5AQ9NQR1 393 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTPRF-214ENST00000496043 FNIP2Q9P278 1114 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 GDAQ9Y2T3 454 aa14.02□□□□□ -0.17
PTPRF-214ENST00000496043 SFI1A8K8P3 1242 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 C2CD4DB7Z1M9 353 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 EDN1P05305 212 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 SMTNP53814 917 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 CREMQ03060 361 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 SIGLEC14Q08ET2 396 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 PTPN21Q16825 1174 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 CYP26C1Q6V0L0 522 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 KCNK18Q7Z418 384 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 PALB2Q86YC2 1186 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 ZDHHC14Q8IZN3 488 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 DAW1Q8N136 415 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 SYT2Q8N9I0 419 aaPredicted RBP14.01□□□□□ -0.17
PTPRF-214ENST00000496043 RIN2Q8WYP3 895 aaPredicted RBP14.01□□□□□ -0.17
PTPRF-214ENST00000496043 ACSF2Q96CM8 615 aaPredicted RBP14.01□□□□□ -0.17
PTPRF-214ENST00000496043 AK8Q96MA6 479 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 PNMA5Q96PV4 448 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 PLIN2Q99541 437 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 ACO2Q99798 780 aaKnown RBP14.01□□□□□ -0.17
PTPRF-214ENST00000496043 RUSC1Q9BVN2 902 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
PTPRF-214ENST00000496043 KCNH6Q9H252 994 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 USTQ9Y2C2 406 aa14.01□□□□□ -0.17
PTPRF-214ENST00000496043 SF3B1O75533 1304 aaKnown RBP eCLIP14□□□□□ -0.171e-7■■■■■ 172.3
PTPRF-214ENST00000496043 CCDC195A0A1B0GUA6 201 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 CASTOR2A6NHX0 329 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 PTGESO14684 152 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 SLC26A4O43511 780 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 BMP15O95972 392 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 GLUD1P00367 558 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 YARSP54577 528 aaKnown RBP14□□□□□ -0.17
PTPRF-214ENST00000496043 ELAVL2Q12926 359 aaKnown RBP14□□□□□ -0.17
PTPRF-214ENST00000496043 C15orf39Q6ZRI6 1047 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 BRAPQ7Z569 592 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 TDRD5Q8NAT2 981 aaKnown RBP14□□□□□ -0.17
PTPRF-214ENST00000496043 CMASQ8NFW8 434 aaPredicted RBP14□□□□□ -0.17
PTPRF-214ENST00000496043 SPIRE2Q8WWL2 714 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 B3GALT6Q96L58 329 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 PAAF1Q9BRP4 392 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 TCHPQ9BT92 498 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 CCDC94Q9BW85 323 aaPredicted RBP14□□□□□ -0.17
PTPRF-214ENST00000496043 PLEKHA4Q9H4M7 779 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 MAN1C1Q9NR34 630 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 KCND2Q9NZV8 630 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 ARHGAP28Q9P2N2 729 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 LIMD1Q9UGP4 676 aa14□□□□□ -0.17
PTPRF-214ENST00000496043 SLC16A4O15374 487 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 PLA2G4BP0C869 781 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 SPATA31D3P0C874 917 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 PLS3P13797 630 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 UBA7P41226 1012 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 GRM5P41594 1212 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 STRN3Q13033 797 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 MAPK7Q13164 816 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 CUL4AQ13619 759 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 NAB2Q15742 525 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 FAM171A1Q5VUB5 890 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 DCLRE1AQ6PJP8 1040 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 SPATA31D4Q6ZUB0 917 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 OTOP3Q7RTS5 596 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 CEP57Q86XR8 500 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 UBALD2Q8IYN6 164 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 KREMEN2Q8NCW0 462 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 CALML4Q96GE6 196 aa13.99□□□□□ -0.17
PTPRF-214ENST00000496043 TTPALQ9BTX7 342 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms