RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 TISP43B9A030 160 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 ANKRD63C9JTQ0 380 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 MCF2P10911 925 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 NDUFA8P51970 172 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 ERVFC1P60507 584 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
SNX17-209ENST00000494893 MCL1Q07820 350 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 KCNA1Q09470 495 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 COASYQ13057 564 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 HACE1Q8IYU2 909 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 GLIS3Q8NEA6 775 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 HPS3Q969F9 1004 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 VN1R3Q9BXE9 311 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 OLFML3Q9NRN5 406 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 KANSL3Q9P2N6 904 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 SEL1LQ9UBV2 794 aa18.76■□□□□ 0.59
SNX17-209ENST00000494893 F8W810 466 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 FAM189A1O60320 539 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 GADD45BO75293 160 aaPredicted RBP18.75■□□□□ 0.59
SNX17-209ENST00000494893 SLFN14P0C7P3 912 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 MYBP10242 640 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 HARSP12081 509 aaKnown RBP18.75■□□□□ 0.59
SNX17-209ENST00000494893 SCP2P22307 547 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 OSTNP61366 133 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 UBE2HP62256 183 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 CUL4BQ13620 913 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 PTPROQ16827 1216 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 TPRNQ4KMQ1 711 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 SEZ6Q53EL9 994 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 HERC4Q5GLZ8 1057 aaPredicted RBP18.75■□□□□ 0.59
SNX17-209ENST00000494893 TCEAL5Q5H9L2 206 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 FSIP1Q8NA03 581 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 MRPS27Q92552 414 aaKnown RBP18.75■□□□□ 0.59
SNX17-209ENST00000494893 BLZF1Q9H2G9 400 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 MAGEF1Q9HAY2 307 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 MARCH5Q9NX47 278 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 ANKFY1Q9P2R3 1169 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 CACNG4Q9UBN1 327 aa18.75■□□□□ 0.59
SNX17-209ENST00000494893 NRP1O14786 923 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 FSCN2O14926 492 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 PPM1AP35813 382 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 AFMP43652 599 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 UBE3AQ05086 875 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 EHHADHQ08426 723 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 GRIK3Q13003 919 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 NOLC1Q14978 699 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNX17-209ENST00000494893 XKR4Q5GH76 650 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 ZBTB41Q5SVQ8 909 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 ALKAL1Q6UXT8 129 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 ADGRD2Q7Z7M1 963 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 PAGE5Q96GU1 130 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 IGSF21Q96ID5 467 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 TMEM175Q9BSA9 504 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 TCHPQ9BT92 498 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 MRPL44Q9H9J2 332 aaKnown RBP18.74■□□□□ 0.59
SNX17-209ENST00000494893 LZTS1Q9Y250 596 aa18.74■□□□□ 0.59
SNX17-209ENST00000494893 SPTBN5Q9NRC6 3674 aaKnown RBP18.73■□□□□ 0.59
SNX17-209ENST00000494893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.73■□□□□ 0.59
SNX17-209ENST00000494893 GOLGA6L4A6NEF3 574 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 HNRNPDLO14979 420 aaKnown RBP18.73■□□□□ 0.59
SNX17-209ENST00000494893 EFEMP2O95967 443 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 ALDH7A1P49419 539 aaKnown RBP18.73■□□□□ 0.59
SNX17-209ENST00000494893 LIG4P49917 911 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 ASIC1P78348 528 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 AMPD3Q01432 767 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 TIGD5Q53EQ6 642 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 CCDC65Q8IXS2 484 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 HVCN1Q96D96 273 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 BICD1Q96G01 975 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 SNX27Q96L92 541 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 PAAF1Q9BRP4 392 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 LRRC27Q9C0I9 530 aa18.73■□□□□ 0.59
SNX17-209ENST00000494893 NSUN3Q9H649 340 aaKnown RBP18.73■□□□□ 0.59
SNX17-209ENST00000494893 A0A0B4J269 797 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 CLDN3O15551 220 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 KLRC4O43908 158 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 GCNT3O95395 438 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 IGFBP6P24592 240 aaPredicted RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 GTF2F1P35269 517 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNX17-209ENST00000494893 HOXD13P35453 343 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 TNFSF9P41273 254 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 SYKP43405 635 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 HYAL1Q12794 435 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 COL19A1Q14993 1142 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 SKOR2Q2VWA4 1001 aaPredicted RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 SLC10A6Q3KNW5 377 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 GLRA4Q5JXX5 417 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 L1TD1Q5T7N2 865 aaKnown RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 UNC13DQ70J99 1090 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 APBB1IPQ7Z5R6 666 aaPredicted RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 SLC17A8Q8NDX2 589 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 RABGGTAQ92696 567 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 ZMAT2Q96NC0 199 aaKnown RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 FAM193BQ96PV7 902 aaPredicted RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 PPP1R10Q96QC0 940 aaKnown RBP18.72■□□□□ 0.59
SNX17-209ENST00000494893 RPS6KC1Q96S38 1066 aa18.72■□□□□ 0.59
SNX17-209ENST00000494893 PYM1Q9BRP8 204 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms