RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ITIH3Q06033 890 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 DMP1Q13316 513 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-216ENST00000494613 TMEM119Q4V9L6 283 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 CES5AQ6NT32 575 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-216ENST00000494613 PAAF1Q9BRP4 392 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 TARS2Q9BW92 718 aaKnown RBP17.16■□□□□ 0.34
LIMS2-216ENST00000494613 PTPRHQ9HD43 1115 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 ARHGAP28Q9P2N2 729 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 KCNG1Q9UIX4 513 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 CDH22Q9UJ99 828 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
LIMS2-216ENST00000494613 SLC26A4O43511 780 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 PLS3P13797 630 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 LONP1P36776 959 aaKnown RBP17.15■□□□□ 0.34
LIMS2-216ENST00000494613 CLCN4P51793 760 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 DSG1Q02413 1049 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 TUSC3Q13454 348 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 NAB2Q15742 525 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 DCAF4L1Q3SXM0 396 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
LIMS2-216ENST00000494613 KIAA1841Q6NSI8 718 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 CALML4Q96GE6 196 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 HERC2P3Q9BVR0 1158 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 RXFP1Q9HBX9 757 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 RAPGEFL1Q9UHV5 662 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 MUTYHQ9UIF7 546 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
LIMS2-216ENST00000494613 TEX28O15482 410 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 URODP06132 367 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 WEE2P0C1S8 567 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 SMTNP53814 917 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 DHX8Q14562 1220 aaKnown RBP17.14■□□□□ 0.33
LIMS2-216ENST00000494613 PTPAQ15257 358 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 USP41Q3LFD5 358 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-216ENST00000494613 ATAT1Q5SQI0 421 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 FUT10Q6P4F1 479 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 FAM173BQ6P4H8 233 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 APBB1IPQ7Z5R6 666 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-216ENST00000494613 LRRC15Q8TF66 581 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 ZBTB45Q96K62 511 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-216ENST00000494613 B3GALT6Q96L58 329 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 FBXL18Q96ME1 805 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
LIMS2-216ENST00000494613 DZANK1Q9NVP4 752 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 KCND2Q9NZV8 630 aa17.14■□□□□ 0.33
LIMS2-216ENST00000494613 CASTOR2A6NHX0 329 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-216ENST00000494613 MARCKSP29966 332 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-216ENST00000494613 DDIT3P35638 169 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 GLUD2P49448 558 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-216ENST00000494613 RESTQ13127 1097 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-216ENST00000494613 ALKAL1Q6UXT8 129 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 ZBTB33Q86T24 672 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 TMEM161BQ8NDZ6 487 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 FEZF2Q8TBJ5 459 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 BLOC1S4Q9NUP1 217 aa17.13■□□□□ 0.33
LIMS2-216ENST00000494613 PROZP22891 400 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 IGFBP6P24592 240 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-216ENST00000494613 GRM5P41594 1212 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 MTHFRP42898 656 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 OSTNP61366 133 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 MCM6Q14566 821 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
LIMS2-216ENST00000494613 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 TMC5Q6UXY8 1006 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 PALB2Q86YC2 1186 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 GPR65Q8IYL9 337 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 CEP120Q8N960 986 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 EDAQ92838 391 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 EPSTI1Q96J88 318 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 RIPOR3Q96MK2 946 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 NECTIN4Q96NY8 510 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 CCSER1Q9C0I3 900 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 CDT1Q9H211 546 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 POMKQ9H5K3 350 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 LARSQ9P2J5 1176 aaKnown RBP17.12■□□□□ 0.33
LIMS2-216ENST00000494613 PHLPP2Q6ZVD8 1323 aa17.12■□□□□ 0.33
LIMS2-216ENST00000494613 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 PRR33A8MZF0 331 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 ABLIM1O14639 778 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 ADH1AP07327 375 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 SPATA31D3P0C874 917 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 MAPTP10636 758 aaKnown RBP17.11■□□□□ 0.33
LIMS2-216ENST00000494613 PLCG1P19174 1290 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
LIMS2-216ENST00000494613 STRN3Q13033 797 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 XKR4Q5GH76 650 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 DCLRE1AQ6PJP8 1040 aa17.11■□□□□ 0.33
LIMS2-216ENST00000494613 SPATA31D4Q6ZUB0 917 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms