RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 POLR2MP0CAP2 368 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 NCLP19338 710 aaKnown RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 GRIK1P39086 918 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 HSD17B4P51659 736 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 CEBPZQ03701 1054 aaKnown RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 SREBF2Q12772 1141 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 BAATQ14032 418 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 INF2Q27J81 1249 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 NSMFQ6X4W1 530 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 CLEC17AQ6ZS10 378 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 PLD6Q8N2A8 252 aaKnown RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 MFSD4AQ8N468 514 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 ANKRD13CQ8N6S4 541 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 CHST13Q8NET6 341 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 GPRC5AQ8NFJ5 357 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 SYTL5Q8TDW5 730 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 TBCKQ8TEA7 893 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 SMCR8Q8TEV9 937 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 COX4I2Q96KJ9 171 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 ZNF396Q96N95 335 aaPredicted RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 TAAR1Q96RJ0 339 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 USP28Q96RU2 1077 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 FTOQ9C0B1 505 aaKnown RBP eCLIP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 FAM86C1Q9NVL1 165 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 RNF186Q9NXI6 227 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 ACTR10Q9NZ32 417 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 COL20A1Q9P218 1284 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 MORF4L1Q9UBU8 362 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 ZC3H7BQ9UGR2 993 aaKnown RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 CPA4Q9UI42 421 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 R3HCC1Q9Y3T6 440 aaKnown RBP7.43□□□□□ -1.22
TRA2B-216ENST00000493864 PCDHB6Q9Y5E3 794 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 ATP6V1DQ9Y5K8 247 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 CLIC4Q9Y696 253 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 MGAMO43451 1857 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 HTTP42858 3142 aa7.43□□□□□ -1.22
TRA2B-216ENST00000493864 LRRN2O75325 713 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 SLC25A27O95847 323 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 FOSP01100 380 aaPredicted RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 CEACAM5P06731 702 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 KIR3DL1P43629 444 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 RPS6P62753 249 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 RNF4P78317 190 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 GHRHRQ02643 423 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 NONOQ15233 471 aaKnown RBP eCLIP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ZNF174Q15697 407 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 TDRD10Q5VZ19 366 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ANO1Q5XXA6 986 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 MCTP2Q6DN12 878 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 C17orf99Q6UX52 265 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 SLC30A10Q6XR72 485 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 RNF207Q6ZRF8 634 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 HNRNPLLQ8WVV9 542 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 PARK7Q99497 189 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ASPNQ9BXN1 380 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ANO3Q9BYT9 981 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 MKRN2Q9H000 416 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 PORCNQ9H237 461 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ACAD9Q9H845 621 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ZCCHC17Q9NP64 241 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 A1CFQ9NQ94 594 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 RTEL1Q9NZ71 1219 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 SUCOQ9UBS9 1254 aaKnown RBP7.42□□□□□ -1.22
TRA2B-216ENST00000493864 RCOR1Q9UKL0 485 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 CAPN6Q9Y6Q1 641 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
TRA2B-216ENST00000493864 FIBPO43427 364 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CA12O43570 354 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 TLR2O60603 784 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 COBLO75128 1261 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 TBC1D8O95759 1140 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 TP53P04637 393 aaPredicted RBP7.41□□□□□ -1.22
TRA2B-216ENST00000493864 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
TRA2B-216ENST00000493864 SSTR4P31391 388 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
TRA2B-216ENST00000493864 UBXN2AP68543 259 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 KRT85P78386 507 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CNTN2Q02246 1040 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CRHR2Q13324 411 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 PTPAQ15257 358 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 LETM2Q2VYF4 491 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 RILPL1Q5EBL4 403 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 TTC38Q5R3I4 469 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 WDR78Q5VTH9 848 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CDKAL1Q5VV42 579 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 C22orf34Q6ZV56 151 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 TEX2Q8IWB9 1127 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 CKAP2LQ8IYA6 745 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 ANKRD35Q8N283 1001 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 SAMD3Q8N6K7 520 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 C4orf32Q8N8J7 132 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 NETO1Q8TDF5 533 aa7.41□□□□□ -1.22
TRA2B-216ENST00000493864 LEO1Q8WVC0 666 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms