RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CYP39A1Q9NYL5 469 aa10.37□□□□□ -0.75
NPHP3-209ENST00000493732 ARHGAP28Q9P2N2 729 aa10.37□□□□□ -0.75
NPHP3-209ENST00000493732 MTRF1LQ9UGC7 380 aaKnown RBP10.37□□□□□ -0.75
NPHP3-209ENST00000493732 FBXO40Q9UH90 709 aa10.37□□□□□ -0.75
NPHP3-209ENST00000493732 SEPT9Q9UHD8 586 aaPredicted RBP10.37□□□□□ -0.75
NPHP3-209ENST00000493732 RSPH14Q9UHP6 348 aa10.37□□□□□ -0.75
NPHP3-209ENST00000493732 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
NPHP3-209ENST00000493732 RRP15Q9Y3B9 282 aaKnown RBP10.37□□□□□ -0.75
NPHP3-209ENST00000493732 PCDHB2Q9Y5E7 798 aa10.37□□□□□ -0.75
NPHP3-209ENST00000493732 NFKBIEO00221 500 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 PPFIA2O75334 1257 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 STBD1O95210 358 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 SUPT20HL2P0C7V6 817 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 SLC1A1P43005 524 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 LIG4P49917 911 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 RWDD2BP57060 319 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 FMO1Q01740 532 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 PRKCEQ02156 737 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 PSMD6Q15008 389 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 TBC1D10BQ4KMP7 808 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-209ENST00000493732 NOL9Q5SY16 702 aaKnown RBP10.36□□□□□ -0.75
NPHP3-209ENST00000493732 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 TMC3Q7Z5M5 1100 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 HOOK3Q86VS8 718 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 PALB2Q86YC2 1186 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 C3orf20Q8ND61 904 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 BCAS4Q8TDM0 211 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 UBLCP1Q8WVY7 318 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-209ENST00000493732 ZNF653Q96CK0 615 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 SAAL1Q96ER3 474 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 CEP89Q96ST8 783 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 PDGFDQ9GZP0 370 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-209ENST00000493732 AVENQ9NQS1 362 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-209ENST00000493732 FEZ2Q9UHY8 353 aaPredicted RBP10.36□□□□□ -0.75
NPHP3-209ENST00000493732 LCMT1Q9UIC8 334 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 RIPK3Q9Y572 518 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 PCDHA3Q9Y5H8 950 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 STYXL1Q9Y6J8 313 aa10.36□□□□□ -0.75
NPHP3-209ENST00000493732 ZNF862O60290 1169 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PIGRP01833 764 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 COMTP21964 271 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 RFC5P40937 340 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 FNTAP49354 379 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PEX5P50542 639 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 AP3M2P53677 418 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 POLGP54098 1239 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 HMGCS2P54868 508 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 DHX9Q08211 1270 aaKnown RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 MESDQ14696 234 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 CYP1B1Q16678 543 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PTPROQ16827 1216 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 DCAF12L1Q5VU92 463 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 MICALCLQ6ZW33 695 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 EXOC8Q8IYI6 725 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 TAS1R2Q8TE23 839 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 MAGOHBQ96A72 148 aaKnown RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PCDHB18PQ96TA0 734 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 NUP85Q9BW27 656 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 GJA3Q9Y6H8 435 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PARP14Q460N5 1801 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 TMEM150BA6NC51 233 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 H0YGN5 161 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 MYO1CO00159 1063 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 ATG7O95352 703 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 DLATP10515 647 aaKnown RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 TBXAS1P24557 533 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 NAMPTP43490 491 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 IFFO1Q0D2I5 559 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SLMAPQ14BN4 828 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 TMEM132BQ14DG7 1078 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 EMC2Q15006 297 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 TRADDQ15628 312 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 CLEC16AQ2KHT3 1053 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SH3D19Q5HYK7 790 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 C15orf39Q6ZRI6 1047 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SYDE1Q6ZW31 735 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 CYFIP1Q7L576 1253 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 JAMLQ86YT9 394 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 ALG3Q92685 438 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 CD101Q93033 1021 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 ZBTB9Q96C00 473 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 VCPIP1Q96JH7 1222 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 MPHOSPH6Q99547 160 aaKnown RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 SH2D3AQ9BRG2 576 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 POLR3FQ9H1D9 316 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PLEKHA4Q9H4M7 779 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 CNOT10Q9H9A5 744 aaKnown RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 A1CFQ9NQ94 594 aaKnown RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 ZNF302Q9NR11 478 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 HOMER3Q9NSC5 361 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 NRBP2Q9NSY0 501 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 MAFBQ9Y5Q3 323 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-209ENST00000493732 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
NPHP3-209ENST00000493732 PASKQ96RG2 1323 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms