RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 SCP2P22307 547 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 ABCD1P33897 745 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 MATR3P43243 847 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTSA-209ENST00000493522 DCAF4L1Q3SXM0 396 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 ZNF568Q3ZCX4 644 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 ZC2HC1CQ53FD0 456 aaPredicted RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 APBB1IPQ7Z5R6 666 aaPredicted RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 ABI1Q8IZP0 508 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 FMR1NBQ8N0W7 255 aaPredicted RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 P2RX5Q93086 422 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 ZNF689Q96CS4 500 aaPredicted RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 PGBD4Q96DM1 585 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 MFSD14AQ96MC6 490 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 FIZ1Q96SL8 496 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 NTPCRQ9BSD7 190 aaKnown RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 TRAIPQ9BWF2 469 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 NXF3Q9H4D5 531 aaKnown RBP12.7□□□□□ -0.38
CTSA-209ENST00000493522 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 TBX20Q9UMR3 447 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 IPPQ9Y573 584 aa12.7□□□□□ -0.38
CTSA-209ENST00000493522 TBKBP1A7MCY6 615 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 TBX10O75333 385 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 CSPG5O95196 566 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 EOMESO95936 686 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 MYBP10242 640 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 ITGA4P13612 1032 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 NDUFV1P49821 464 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 LIG4P49917 911 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 MRE11P49959 708 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 UBE2HP62256 183 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 FAM189BP81408 668 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 NHLH1Q02575 133 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 DLX2Q07687 328 aaPredicted RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 ALCAMQ13740 583 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 CLLU1OSQ5K130 101 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 FAM26FQ5R3K3 315 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 STXBP4Q6ZWJ1 553 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 ZBTB33Q86T24 672 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 ZNF598Q86UK7 904 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 SMG8Q8ND04 991 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 HPS3Q969F9 1004 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 CCDC47Q96A33 483 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 HVCN1Q96D96 273 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 FBXL18Q96ME1 805 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 ACO2Q99798 780 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 TCHPQ9BT92 498 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 FGFBP2Q9BYJ0 223 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 IGFLR1Q9H665 355 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
CTSA-209ENST00000493522 RNF19AQ9NV58 838 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 CD207Q9UJ71 328 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 TNFSF13BQ9Y275 285 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 INPP5FQ9Y2H2 1132 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 HES2Q9Y543 173 aa12.69□□□□□ -0.38
CTSA-209ENST00000493522 USP34Q70CQ2 3546 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 MEIS3P2A8K0S8 358 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 ZNF623O75123 536 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 NR1I2O75469 434 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 PPP1R37O75864 691 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 MYL1P05976 194 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 CASP5P51878 434 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 GTF2BQ00403 316 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 SNW1Q13573 536 aaKnown RBP12.68□□□□□ -0.38
CTSA-209ENST00000493522 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTSA-209ENST00000493522 POSTNQ15063 836 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 KANK3Q6NY19 840 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 GLB1LQ6UWU2 654 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 ZPBP2Q6X784 338 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 HFE2Q6ZVN8 426 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 ZNF720Q7Z2F6 126 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 MAP4K3Q8IVH8 894 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 CRIPAKQ8N1N5 446 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 LRRC43Q8N309 656 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 ENGASEQ8NFI3 743 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 TMEM117Q9H0C3 514 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 CDT1Q9H211 546 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 ST6GALNAC4Q9H4F1 302 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 RSAD1Q9HA92 442 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 MUTYHQ9UIF7 546 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
CTSA-209ENST00000493522 MRPL42Q9Y6G3 142 aaKnown RBP12.68□□□□□ -0.38
CTSA-209ENST00000493522 PVALEFA0A1B0GWK0 134 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 GOLGA6L22H0YM25 854 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 LINC01565O15544 149 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 KLRC4O43908 158 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 TOM1L1O75674 476 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 PRPF6O94906 941 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 RPN1P04843 607 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 GTF2F1P35269 517 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms