RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CLDN3O15551 220 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 C22orf31O95567 290 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 CTAGE8P0CG41 777 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 HOXD8P13378 290 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 TNFAIP3P21580 790 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 ACOT2P49753 483 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 NAP1L1P55209 391 aaKnown RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 INHBEP58166 350 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 IFI16Q16666 785 aaKnown RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 MORN1Q5T089 497 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 ENOSF1Q7L5Y1 443 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 CTAGE6Q86UF2 777 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 RHPN2Q8IUC4 686 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 CTAGE4Q8IX94 777 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 FAM71AQ8IYT1 594 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 PDCL2Q8N4E4 241 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 GPR161Q8N6U8 529 aaKnown RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 NPLOC4Q8TAT6 608 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 TAS1R2Q8TE23 839 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 TRAPPC12Q8WVT3 735 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 ACO2Q99798 780 aaKnown RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 PACSIN1Q9BY11 444 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 NFKBIZQ9BYH8 718 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 RBAKQ9NYW8 714 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-216ENST00000492977 ANKFY1Q9P2R3 1169 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 CPA4Q9UI42 421 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 PCDHGC5Q9Y5F6 944 aa15.17■□□□□ 0.02
PTPN7-216ENST00000492977 A0A0A6YYK5 440 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 IGF2BP3O00425 579 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 LRRN2O75325 713 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 EDN1P05305 212 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 PRKCBP05771 671 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 INSRRP14616 1297 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 SMPD1P17405 629 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 CKAP4Q07065 602 aaKnown RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 MAP2K5Q13163 448 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 ZACNQ401N2 412 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 RGMBQ6NW40 437 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 PPM1KQ8N3J5 372 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 METTL13Q8N6R0 699 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 OLIG1Q8TAK6 271 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 LNX1Q8TBB1 728 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 U2AF1L4Q8WU68 220 aaKnown RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 SHC3Q92529 594 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 ZNF516Q92618 1163 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 C16orf70Q9BSU1 422 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 FZD8Q9H461 694 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
PTPN7-216ENST00000492977 SNX12Q9UMY4 172 aa15.16■□□□□ 0.02
PTPN7-216ENST00000492977 TULP1O00294 542 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-216ENST00000492977 ACKR2O00590 384 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 BUB1O43683 1085 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 C4BPAP04003 597 aaKnown RBP15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TCP1P17987 556 aaKnown RBP15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TNNI1P19237 187 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 PTENP60484 403 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 GCNT1Q02742 428 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 MCL1Q07820 350 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 GRM1Q13255 1194 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TAF1CQ15572 869 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TSHZ1Q6ZSZ6 1077 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 SAPCD2Q86UD0 394 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 RPGRIP1Q96KN7 1286 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 KREMEN1Q96MU8 473 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 CGRRF1Q99675 332 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 PDE11AQ9HCR9 933 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 H3BRB1 525 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 OGTO15294 1046 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 HOXC6P09630 235 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TMOD1P28289 359 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 CLCN3P51790 818 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 AP3M2P53677 418 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 DGKDQ16760 1214 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 WDR44Q5JSH3 913 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 LINC01465Q8N7H1 131 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 OR6J1Q8NGC5 347 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TCHPQ9BT92 498 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 TUT1Q9H6E5 874 aaKnown RBP15.15■□□□□ 0.02
PTPN7-216ENST00000492977 ZHX1Q9UKY1 873 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-216ENST00000492977 HYOU1Q9Y4L1 999 aa15.15■□□□□ 0.02
PTPN7-216ENST00000492977 CNTNAP2Q9UHC6 1331 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 EVPLQ92817 2033 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 FAM189A1O60320 539 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 PALMO75781 387 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 MMP3P08254 477 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 H2AFXP16104 143 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-216ENST00000492977 PROZP22891 400 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 TNFAIP2Q03169 654 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms