RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RUNDC1Q96C34 613 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PGBD4Q96DM1 585 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 KLHL11Q9NVR0 708 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGA9Q9Y5G4 932 aaKnown RBP3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGA8Q9Y5G5 932 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGA7Q9Y5G6 932 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGA6Q9Y5G7 932 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGA3Q9Y5H0 932 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGA2Q9Y5H1 932 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 SCN11AQ9UI33 1791 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 FOXN3O00409 490 aaPredicted RBP3.65□□□□□ -1.83
SNX13-209ENST00000492626 GOLIM4O00461 696 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 TPP1O14773 563 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 C5AR1P21730 350 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 SMARCA1P28370 1054 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 TRAPPC10P48553 1259 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 CCT5P48643 541 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 MUM1Q2TAK8 710 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PRR16Q569H4 304 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 RNF220Q5VTB9 566 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 GADL1Q6ZQY3 521 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 RSPH3Q86UC2 560 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PDZD8Q8NEN9 1154 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 PLEKHO2Q8TD55 490 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 ASIC4Q96FT7 647 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 ZNF496Q96IT1 587 aaPredicted RBP3.65□□□□□ -1.83
SNX13-209ENST00000492626 ZNF277Q9NRM2 450 aaPredicted RBP3.65□□□□□ -1.83
SNX13-209ENST00000492626 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNX13-209ENST00000492626 PCDHGB6Q9Y5F9 930 aa3.65□□□□□ -1.83
SNX13-209ENST00000492626 CCDC154A6NI56 674 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 MPOP05164 745 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 PEX2P28328 305 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 ATP2B3Q16720 1220 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 EMC4Q5J8M3 183 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 ESRP1Q6NXG1 681 aaKnown RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 TBCBQ99426 244 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 HTATIP2Q9BUP3 242 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 GTF2A1LQ9UNN4 478 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 CFAP20Q9Y6A4 193 aaKnown RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 TBX3O15119 743 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 PCDH8O95206 1070 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 FTLP02792 175 aaPredicted RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 CD53P19397 219 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 FSTP19883 344 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 CREB3L3Q68CJ9 461 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 KIAA1841Q6NSI8 718 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 TREML4Q6UXN2 200 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 CHST15Q7LFX5 561 aaPredicted RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 FAM156AQ8NDB6 213 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 LRTOMTQ8WZ04 291 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 UHRF1Q96T88 793 aaPredicted RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 NOL10Q9BSC4 688 aaKnown RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 LRRC27Q9C0I9 530 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 CHST12Q9NRB3 414 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 OGDHLQ9ULD0 1010 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 MAGED2Q9UNF1 606 aaPredicted RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 PCDHB6Q9Y5E3 794 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 PPP2R3BQ9Y5P8 575 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 F8W031 263 aaPredicted RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 GSPT1P15170 499 aaKnown RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 PTGS1P23219 599 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 COL8A1P27658 744 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 MTNR1BP49286 362 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 NKX3-2P78367 333 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 MALLQ13021 153 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 NR1I3Q14994 352 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 MAN2A1Q16706 1144 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 VASNQ6EMK4 673 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 TTC7BQ86TV6 843 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 SLCO6A1Q86UG4 719 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 RBM12BQ8IXT5 1001 aaKnown RBP3.64□□□□□ -1.83
SNX13-209ENST00000492626 DRC7Q8IY82 874 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 CDYL2Q8N8U2 506 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 TEX19Q8NA77 164 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 RGMAQ96B86 450 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 BORCS6Q96GS4 357 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 PNPLA8Q9NP80 782 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 KAT6BQ8WYB5 2073 aa3.64□□□□□ -1.83
SNX13-209ENST00000492626 FZD9O00144 591 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 DVL2O14641 736 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 UBXN7O94888 489 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 PDE6BP35913 854 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 GPR15P49685 360 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ZNF280AP59817 542 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 ALDH6A1Q02252 535 aaKnown RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 LMOD3Q0VAK6 560 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 TRIM14Q14142 442 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ALFQ53S48 1182 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 INTS5Q6P9B9 1019 aaKnown RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 DPP8Q6V1X1 898 aaPredicted RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 TMEM52Q8NDY8 209 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 C16orf92Q96LL3 132 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 FOXB1Q99853 325 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 TMEM60Q9H2L4 133 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ADAMTS10Q9H324 1103 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 ZHX3Q9H4I2 956 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 MANSC1Q9H8J5 431 aa3.63□□□□□ -1.83
SNX13-209ENST00000492626 SARS2Q9NP81 518 aaKnown RBP3.63□□□□□ -1.83
SNX13-209ENST00000492626 DDX21Q9NR30 783 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNX13-209ENST00000492626 PLAGL2Q9UPG8 496 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms