RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 MTERF2Q49AM1 385 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ZC2HC1CQ53FD0 456 aaPredicted RBP22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MIS18BP1Q6P0N0 1132 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 STAMBPL1Q96FJ0 436 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ITGA4P13612 1032 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 EIF2AK2P19525 551 aaKnown RBP22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SAT1P21673 171 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PDE1CQ14123 709 aaPredicted RBP22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CCDC125Q86Z20 511 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PIP4K2CQ8TBX8 421 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KLC2Q9H0B6 622 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GNA15P30679 374 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PTENP60484 403 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CATSPER3Q86XQ3 398 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SMYD3Q9H7B4 428 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 UBN1Q9NPG3 1134 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DDX56Q9NY93 547 aaKnown RBP22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TTLL3Q9Y4R7 772 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FAM196BA6NMK8 535 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 UBOX5O94941 541 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PSAPP07602 524 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MAGEA4P43358 317 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CACNB3P54284 484 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 HSPH1Q92598 858 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ZKSCAN4Q969J2 545 aaPredicted RBP22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PSMC3IPQ9P2W1 217 aaPredicted RBP22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 NEU2Q9Y3R4 380 aa22.38■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 K7ERI5 159 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GIPC1O14908 333 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GPC4O75487 556 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TBC1D22BQ9NU19 505 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 HSPBP1Q9NZL4 362 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ESRRGP62508 458 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MKRN4PQ13434 485 aaPredicted RBP22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RPS6KA2Q15349 733 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KCTD17Q8N5Z5 321 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PPM1NQ8N819 430 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CDHR1Q96JP9 859 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RPS6KC1Q96S38 1066 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KCND2Q9NZV8 630 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RNF225M0QZC1 329 aaPredicted RBP22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KITP10721 976 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TFDP2Q14188 446 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PCDHGC5Q9Y5F6 944 aa22.37■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MTMR1Q13613 665 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MCPH1Q8NEM0 835 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ZNF526Q8TF50 670 aaPredicted RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SCFD1Q8WVM8 642 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GINS2Q9Y248 185 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CRKP46108 304 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RGS9BPQ6ZS82 235 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DTX3LQ8TDB6 740 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CNOT7Q9UIV1 285 aaKnown RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CLRN2A0PK11 232 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TBXAS1P24557 533 aaPredicted RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ECE1P42892 770 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ITGB3BPQ13352 177 aaPredicted RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FAM160B1Q5W0V3 765 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ALKBH8Q96BT7 664 aaKnown RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 WWP1Q9H0M0 922 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PARVAQ9NVD7 372 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ATMINO43313 823 aaPredicted RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DNAJC8O75937 253 aaPredicted RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CCND2P30279 289 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RAPH1Q70E73 1250 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CLEC10AQ8IUN9 316 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ANKMY2Q8IV38 441 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ABTB1Q969K4 478 aaPredicted RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 TSSK1BQ9BXA7 367 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ALG13Q9NP73 1137 aaKnown RBP22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 OSGEPQ9NPF4 335 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 STRIP2Q9ULQ0 834 aa22.36■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 P4HA2O15460 535 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 OR6B2Q6IFH4 312 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 NUDCD3Q8IVD9 361 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RANBP17Q9H2T7 1088 aaKnown RBP22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FAM53CQ9NYF3 392 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 WDR64B1ANS9 1081 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KRT7P08729 469 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 GPSM2P81274 684 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CENPCQ03188 943 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DEUP1Q05D60 604 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SURF1Q15526 300 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 EFHD1Q9BUP0 239 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KLRC4O43908 158 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 EPHB1P54762 984 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 CEP55Q53EZ4 464 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MIIPQ5JXC2 388 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 SCARA5Q6ZMJ2 495 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RFX8Q6ZV50 586 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RCOR2Q8IZ40 523 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 MAGEB18Q96M61 343 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 PPWD1Q96BP3 646 aaKnown RBP22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 AS3MTQ9HBK9 375 aa22.35■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ART3Q13508 389 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 ZNF394Q53GI3 561 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 FSCBQ5H9T9 825 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 RHPN2Q8IUC4 686 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 KCNA3P22001 575 aa22.34■■□□□ 1.17
CHKB-CPT1B-203ENST00000492556 DNAJC3Q13217 504 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms