RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 RSPO4Q2I0M5 234 aaPredicted RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 RTP2Q5QGT7 225 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 SLC27A1Q6PCB7 646 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 PRSS55Q6UWB4 352 aaPredicted RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 PARM1Q6UWI2 310 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 MAML2Q8IZL2 1156 aaPredicted RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 DYDC2Q96IM9 177 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
SSR4-212ENST00000491833 ZSWIM4Q9H7M6 989 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 XPNPEP1Q9NQW7 623 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 COL4A3Q01955 1670 aa16.07■□□□□ 0.16
SSR4-212ENST00000491833 CCNT1O60563 726 aaKnown RBP16.06■□□□□ 0.16
SSR4-212ENST00000491833 TADA2AO75478 443 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 NPTXRO95502 500 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 C8AP07357 584 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 HOXA9P31269 272 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 MAGEA9P43362 315 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 PFKPQ01813 784 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 CYP4A11Q02928 519 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 POU5F1BQ06416 359 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 CAPSQ13938 189 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
SSR4-212ENST00000491833 UBXN2BQ14CS0 331 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 AMHR2Q16671 573 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 PPM1LQ5SGD2 360 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 CPLX2Q6PUV4 134 aaKnown RBP16.06■□□□□ 0.16
SSR4-212ENST00000491833 GSTCDQ8NEC7 633 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
SSR4-212ENST00000491833 AIFM3Q96NN9 605 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 RPP25Q9BUL9 199 aaKnown RBP16.06■□□□□ 0.16
SSR4-212ENST00000491833 DDX23Q9BUQ8 820 aaKnown RBP16.06■□□□□ 0.16
SSR4-212ENST00000491833 OSBPL6Q9BZF3 934 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 RGL1Q9NZL6 768 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 PARP2Q9UGN5 583 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 PCDHGA2Q9Y5H1 932 aa16.06■□□□□ 0.16
SSR4-212ENST00000491833 XYLBO75191 536 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 NTHL1P78549 312 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 TOB2Q14106 344 aaPredicted RBP16.05■□□□□ 0.16
SSR4-212ENST00000491833 PSMD5Q16401 504 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 VARS2Q5ST30 1063 aaKnown RBP16.05■□□□□ 0.16
SSR4-212ENST00000491833 RSPO2Q6UXX9 243 aaPredicted RBP16.05■□□□□ 0.16
SSR4-212ENST00000491833 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 GPR161Q8N6U8 529 aaKnown RBP16.05■□□□□ 0.16
SSR4-212ENST00000491833 ASAP3Q8TDY4 903 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 HASPINQ8TF76 798 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 PIK3R5Q8WYR1 880 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 RABGGTAQ92696 567 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 FGF13Q92913 245 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 SECISBP2LQ93073 1101 aaKnown RBP16.05■□□□□ 0.16
SSR4-212ENST00000491833 TTPALQ9BTX7 342 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 PHF20Q9BVI0 1012 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 LTB4R2Q9NPC1 389 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 POLIQ9UNA4 740 aa16.05■□□□□ 0.16
SSR4-212ENST00000491833 ZBTB39O15060 712 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 CCL16O15467 120 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 B4GALT5O43286 388 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 DGAT1O75907 488 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 SDHBP21912 280 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 CSTF1Q05048 431 aaKnown RBP16.04■□□□□ 0.16
SSR4-212ENST00000491833 SPIRE1Q08AE8 756 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 TUSC3Q13454 348 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 SLC44A4Q53GD3 710 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 CDR2LQ86X02 465 aaPredicted RBP16.04■□□□□ 0.16
SSR4-212ENST00000491833 SLFN12Q8IYM2 578 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 HAS1Q92839 578 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 KLK14Q9P0G3 267 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 CACNG4Q9UBN1 327 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 KCNJ14Q9UNX9 436 aa16.04■□□□□ 0.16
SSR4-212ENST00000491833 SMG5Q9UPR3 1016 aaKnown RBP16.04■□□□□ 0.16
SSR4-212ENST00000491833 CACNA1IQ9P0X4 2223 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 KIF4AO95239 1232 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 POU2F2P09086 479 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 ELAVL2Q12926 359 aaKnown RBP16.03■□□□□ 0.16
SSR4-212ENST00000491833 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 PIK3AP1Q6ZUJ8 805 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 CEP57Q86XR8 500 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 SLC7A14Q8TBB6 771 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 CNTNAP3BQ96NU0 1288 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 KXD1Q9BQD3 176 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 CLSTN3Q9BQT9 956 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 PAAF1Q9BRP4 392 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 CNTNAP3Q9BZ76 1288 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 CEP250Q9BV73 2442 aa16.03■□□□□ 0.16
SSR4-212ENST00000491833 A0A1B0GUA9 196 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 FAM170BA6NMN3 283 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 BAG4O95429 457 aaKnown RBP16.02■□□□□ 0.16
SSR4-212ENST00000491833 XBP1P17861 261 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 GLRA2P23416 452 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 ARL2P36404 184 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 STK3Q13188 491 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 ZBTB41Q5SVQ8 909 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 FAM171A1Q5VUB5 890 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 TPRG1Q6ZUI0 275 aa16.02■□□□□ 0.16
SSR4-212ENST00000491833 ITFG1Q8TB96 612 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms