RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RINT1Q6NUQ1 792 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 FUT10Q6P4F1 479 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 CCDC149Q6ZUS6 474 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 OTOP3Q7RTS5 596 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 SLC22A17Q8WUG5 538 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 HDAC7Q8WUI4 952 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 BCL7CQ8WUZ0 217 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 UROC1Q96N76 676 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 KCNH6Q9H252 994 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 PLEKHA4Q9H4M7 779 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 USTQ9Y2C2 406 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 GDAQ9Y2T3 454 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 KIAA1671Q9BY89 1806 aa18.2■□□□□ 0.5
PDLIM2-217ENST00000491330 BDP1A6H8Y1 2624 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 VPS37CA5D8V6 355 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 KRT18P05783 430 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 EPCAMP16422 314 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 GUCY2CP25092 1073 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 TXLNAP40222 546 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 NPTX2P47972 431 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 CLCN4P51793 760 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 DSG1Q02413 1049 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 ECM1Q16610 540 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 ZNF568Q3ZCX4 644 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 C15orf39Q6ZRI6 1047 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 BSNDQ8WZ55 320 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 SNX21Q969T3 373 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 CCDC113Q9H0I3 377 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 PIDD1Q9HB75 910 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 MIOSQ9NXC5 875 aa18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-217ENST00000491330 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 RECQL4O94761 1208 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 CDC25AP30304 524 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 LONP1P36776 959 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 MATR3P43243 847 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 ZXDAP98168 799 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 HYIQ5T013 277 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 TMC5Q6UXY8 1006 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 TRIM67Q6ZTA4 783 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 CEP57Q86XR8 500 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 UBALD2Q8IYN6 164 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 SYT2Q8N9I0 419 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 RIN2Q8WYP3 895 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 PBXIP1Q96AQ6 731 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 DDX27Q96GQ7 796 aaKnown RBP18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 PRRX2Q99811 253 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 TTPALQ9BTX7 342 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 RXFP1Q9HBX9 757 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 FNIP2Q9P278 1114 aa18.18■□□□□ 0.5
PDLIM2-217ENST00000491330 PP2D1A8MPX8 630 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 K7ELQ4 463 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 PLA2G4BP0C869 781 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 MCF2P10911 925 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 PLS3P13797 630 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 SIGLEC14Q08ET2 396 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 MTMR3Q13615 1198 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 KYAT1Q16773 422 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 PTPN21Q16825 1174 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 KIAA0319Q5VV43 1072 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 C1orf186Q6ZWK4 172 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 GPR149Q86SP6 731 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 SPIRE2Q8WWL2 714 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 BICD1Q96G01 975 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 ACAP3Q96P50 834 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 NTPCRQ9BSD7 190 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 KIFC3Q9BVG8 833 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 CHST7Q9NS84 486 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 CCDC39Q9UFE4 941 aa18.17■□□□□ 0.5
PDLIM2-217ENST00000491330 VCANP13611 3396 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 TMEM221A6NGB7 291 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 CASTOR2A6NHX0 329 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 M0R296 226 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 TEX28O15482 410 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 B4GALT3O60512 393 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 LILRB3O75022 631 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 B3GAT3O94766 335 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 SP100P23497 879 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 GRM5P41594 1212 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 LIN9Q5TKA1 542 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 FAM171A1Q5VUB5 890 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 DCLRE1AQ6PJP8 1040 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 BMP8AQ7Z5Y6 402 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 CMASQ8NFW8 434 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 PLIN2Q99541 437 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 ACO2Q99798 780 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 POMKQ9H5K3 350 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 POLD4Q9HCU8 107 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 MAN1C1Q9NR34 630 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 ODF2LQ9ULJ1 636 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 SORCS3Q9UPU3 1222 aa18.16■□□□□ 0.5
PDLIM2-217ENST00000491330 CCDC195A0A1B0GUA6 201 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 CLDN3O15551 220 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 TBCAO75347 108 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 PLA2G5P39877 138 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 IL17AQ16552 155 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 NT5DC1Q5TFE4 455 aa18.15■□□□□ 0.5
PDLIM2-217ENST00000491330 MPZL3Q6UWV2 235 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms