RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SLC16A4O15374 487 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 KIF11P52732 1056 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 IER5Q5VY09 327 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 EPM2AIP1Q7L775 607 aaPredicted RBP24.68■■□□□ 1.54
USF3-203ENST00000491165 SESTD1Q86VW0 696 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 FAM49AQ9H0Q0 323 aaPredicted RBP24.68■■□□□ 1.54
USF3-203ENST00000491165 DEF6Q9H4E7 631 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 TRMT13Q9NUP7 481 aaKnown RBP24.68■■□□□ 1.54
USF3-203ENST00000491165 SNX12Q9UMY4 172 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 EPHB6O15197 1021 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 RTP1P59025 263 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 TMEM62Q0P6H9 643 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 LAMTOR4Q0VGL1 99 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 PSMD2Q13200 908 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 PSPC1Q8WXF1 523 aaKnown RBP24.68■■□□□ 1.54
USF3-203ENST00000491165 STRA6Q9BX79 667 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 MMRN2Q9H8L6 949 aa24.68■■□□□ 1.54
USF3-203ENST00000491165 CCDC169A6NNP5 214 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 GAS2O43903 313 aaKnown RBP24.67■■□□□ 1.54
USF3-203ENST00000491165 PHACTR2O75167 634 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 PPP1R37O75864 691 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 PRPF6O94906 941 aaKnown RBP24.67■■□□□ 1.54
USF3-203ENST00000491165 GCNT3O95395 438 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 LCA5LO95447 670 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 CYP2C9P11712 490 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 NCKAP1LP55160 1127 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 DMP1Q13316 513 aaPredicted RBP24.67■■□□□ 1.54
USF3-203ENST00000491165 CCDC70Q6NSX1 233 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 TMEM161BQ8NDZ6 487 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 NTPCRQ9BSD7 190 aaKnown RBP24.67■■□□□ 1.54
USF3-203ENST00000491165 SEL1LQ9UBV2 794 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 HPCAL4Q9UM19 191 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 SIP14410 1827 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 K7ENM7 598 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 SLC43A3Q8NBI5 491 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 COG1Q8WTW3 980 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 DNAJB3Q8WWF6 145 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 JPH2Q9BR39 696 aaPredicted RBP24.67■■□□□ 1.54
USF3-203ENST00000491165 AKT3Q9Y243 479 aa24.67■■□□□ 1.54
USF3-203ENST00000491165 SRGAP2CP0DJJ0 459 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 EIF4A3P38919 411 aaKnown RBP24.66■■□□□ 1.54
USF3-203ENST00000491165 TAS1R3Q7RTX0 852 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 EXOC8Q8IYI6 725 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 TCP11Q8WWU5 503 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 TSG101Q99816 390 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 SENP6Q9GZR1 1112 aaPredicted RBP24.66■■□□□ 1.54
USF3-203ENST00000491165 C17orf75Q9HAS0 396 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 CAPN6Q9Y6Q1 641 aa24.66■■□□□ 1.54
USF3-203ENST00000491165 LRRIQ4A6NIV6 560 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 AKR1B10O60218 316 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 C2orf54Q08AI8 447 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 LRRC55Q6ZSA7 311 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 NELFCDQ8IXH7 590 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 RNF149Q8NC42 400 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 NLRP4Q96MN2 994 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 KMT5AQ9NQR1 393 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 SMIM35A0A1B0GVV1 85 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 LRRC53A6NM62 1247 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 PRLRP16471 622 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 FOXR2Q6PJQ5 311 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 RRAGAQ7L523 313 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 HAUS6Q7Z4H7 955 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 CREG2Q8IUH2 290 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 SPIRE2Q8WWL2 714 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 ALS2CR12Q96Q35 445 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 FAM204AQ9H8W3 233 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 IFT122Q9HBG6 1241 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 ARHGAP28Q9P2N2 729 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 USP20Q9Y2K6 914 aa24.65■■□□□ 1.54
USF3-203ENST00000491165 RNF40O75150 1001 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 CSDE1O75534 798 aaKnown RBP24.64■■□□□ 1.54
USF3-203ENST00000491165 ZMYND10O75800 440 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 EDN1P05305 212 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 NAMPTP43490 491 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 PTGISQ16647 500 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 CCNI2Q6ZMN8 369 aaPredicted RBP24.64■■□□□ 1.54
USF3-203ENST00000491165 ZNF572Q7Z3I7 529 aaPredicted RBP24.64■■□□□ 1.54
USF3-203ENST00000491165 GOLGA6L1Q8N7Z2 621 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 IFT74Q96LB3 600 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 TRPV6Q9H1D0 765 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 CDHR5Q9HBB8 845 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 ZMYM2Q9UBW7 1377 aa24.64■■□□□ 1.54
USF3-203ENST00000491165 A0A0U1RQG5 324 aaPredicted RBP24.64■■□□□ 1.53
USF3-203ENST00000491165 B4GALT4O60513 344 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 SYF2O95926 243 aaKnown RBP24.64■■□□□ 1.53
USF3-203ENST00000491165 IVLP07476 585 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 GNAT1P11488 350 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 TMOD1P28289 359 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 ITIH3Q06033 890 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 MXD4Q14582 209 aaPredicted RBP24.64■■□□□ 1.53
USF3-203ENST00000491165 SERINC5Q86VE9 423 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 MMGT1Q8N4V1 131 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 MINDY3Q9H8M7 445 aa24.64■■□□□ 1.53
USF3-203ENST00000491165 ARVCFO00192 962 aa24.63■■□□□ 1.53
USF3-203ENST00000491165 RPS6KA5O75582 802 aa24.63■■□□□ 1.53
USF3-203ENST00000491165 MOCS3O95396 460 aa24.63■■□□□ 1.53
USF3-203ENST00000491165 IQCF3P0C7M6 154 aa24.63■■□□□ 1.53
USF3-203ENST00000491165 ATN1P54259 1190 aaPredicted RBP24.63■■□□□ 1.53
USF3-203ENST00000491165 GTF2BQ00403 316 aa24.63■■□□□ 1.53
USF3-203ENST00000491165 BAP1Q92560 729 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms