RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 EMC2Q15006 297 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 IL17AQ16552 155 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 PLPP4Q5VZY2 271 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 TWF2Q6IBS0 349 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 OTUD6AQ7L8S5 288 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 ZNF410Q86VK4 478 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 CATSPER3Q86XQ3 398 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 ZNF280BQ86YH2 543 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 RNF135Q8IUD6 432 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 SLC39A11Q8N1S5 342 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 RNF149Q8NC42 400 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 FBXO18Q8NFZ0 1043 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 WHAMMQ8TF30 809 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 AUTS2Q8WXX7 1259 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 MRPS27Q92552 414 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 ZSCAN31Q96LW9 406 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 NAP1L4Q99733 375 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 ARHGAP9Q9BRR9 750 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 LLPHQ9BRT6 129 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 APOL5Q9BWW9 433 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 EIF2AQ9BY44 585 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 TLE6Q9H808 572 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 BRMS1Q9HCU9 246 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 CHST12Q9NRB3 414 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 FAM105AQ9NUU6 356 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 DNAJB4Q9UDY4 337 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 BARX2Q9UMQ3 279 aaPredicted RBP8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 INPP5FQ9Y2H2 1132 aa8.15□□□□□ -1.1
PRPF4B-208ENST00000490653 B4GALT5O43286 388 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 DKC1O60832 514 aaKnown RBP eCLIP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 ZNF623O75123 536 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 LYPLA2O95372 231 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 GALTP07902 379 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 GLRA2P23416 452 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 RBM25P49756 843 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 RARRES1P49788 294 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 VCPP55072 806 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 BCAR1P56945 870 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 PLCB3Q01970 1234 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 CAPSQ13938 189 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 DUSP6Q16828 381 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 LLGL2Q6P1M3 1020 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 SRGAP1Q7Z6B7 1085 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 MRPL10Q7Z7H8 261 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 VWA5B2Q8N398 1253 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 EFHBQ8N7U6 833 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 SMG8Q8ND04 991 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 PSPC1Q8WXF1 523 aaKnown RBP8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 BSNDQ8WZ55 320 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 ZNF558Q96NG5 402 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 VN1R3Q9BXE9 311 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 GBP3Q9H0R5 595 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 CXCL16Q9H2A7 254 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 TLR9Q9NR96 1032 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 ANKEF1Q9NU02 776 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 PRKAG3Q9UGI9 489 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 HES2Q9Y543 173 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 PCDHB6Q9Y5E3 794 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 PCDHB2Q9Y5E7 798 aa8.14□□□□□ -1.11
PRPF4B-208ENST00000490653 ZFHX2Q9C0A1 2572 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 PP2D1A8MPX8 630 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 LOC730098B7Z3J9 87 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 F8W810 466 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 ASAP2O43150 1006 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TSPAN1O60635 241 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 USO1O60763 962 aaKnown RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CXCL14O95715 111 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 EDN1P05305 212 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 LAG3P18627 525 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 SFPQP23246 707 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CDC25AP30304 524 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 RFC5P40937 340 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CTSOP43234 321 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 SLC11A1P49279 550 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 NDUFV1P49821 464 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 PTENP60484 403 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 CDC42EP1Q00587 391 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 MBTD1Q05BQ5 628 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 KCNC3Q14003 757 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 SAFBQ15424 915 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 NOMO2Q5JPE7 1267 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 INTS6LQ5JSJ4 861 aaKnown RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TTC38Q5R3I4 469 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 SYCE2Q6PIF2 218 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TAS1R1Q7RTX1 841 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 BMP8AQ7Z5Y6 402 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 ABI1Q8IZP0 508 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 FAM184AQ8NB25 1140 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 RABGGTAQ92696 567 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 EDAQ92838 391 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 ASIC4Q96FT7 647 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TMX3Q96JJ7 454 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 JPH2Q9BR39 696 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 TRAIPQ9BWF2 469 aa8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 INO80BQ9C086 356 aaPredicted RBP8.13□□□□□ -1.11
PRPF4B-208ENST00000490653 POLR3FQ9H1D9 316 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms