RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 MRPL17Q9NRX2 175 aaKnown RBP21.7■■□□□ 1.06
SMC4-222ENST00000490207 BLOC1S4Q9NUP1 217 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 KCNG1Q9UIX4 513 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 PLXNA3P51805 1871 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 CITO14578 2027 aa21.7■■□□□ 1.06
SMC4-222ENST00000490207 SMTNP53814 917 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 CEBPZQ03701 1054 aaKnown RBP21.69■■□□□ 1.06
SMC4-222ENST00000490207 STRN3Q13033 797 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 TUSC3Q13454 348 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 TPRNQ4KMQ1 711 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 ARSHQ5FYA8 562 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 RNF168Q8IYW5 571 aaPredicted RBP21.69■■□□□ 1.06
SMC4-222ENST00000490207 SUSD6Q92537 303 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 REEP2Q9BRK0 252 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 TARS2Q9BW92 718 aaKnown RBP21.69■■□□□ 1.06
SMC4-222ENST00000490207 CCSER1Q9C0I3 900 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 ZSCAN16Q9H4T2 348 aaPredicted RBP21.69■■□□□ 1.06
SMC4-222ENST00000490207 EPHX3Q9H6B9 360 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 DZANK1Q9NVP4 752 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 FBXO2Q9UK22 296 aaPredicted RBP21.69■■□□□ 1.06
SMC4-222ENST00000490207 ODF2LQ9ULJ1 636 aa21.69■■□□□ 1.06
SMC4-222ENST00000490207 PDCD11Q14690 1871 aaKnown RBP21.69■■□□□ 1.06
SMC4-222ENST00000490207 CASTOR2A6NHX0 329 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 C2CD2LO14523 706 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 EFEMP2O95967 443 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 THP07101 528 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 EPCAMP16422 314 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 GLUD2P49448 558 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 MCM6Q14566 821 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 HSP90AA2PQ14568 343 aaPredicted RBP21.68■■□□□ 1.06
SMC4-222ENST00000490207 SPECC1Q5M775 1068 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 FUT10Q6P4F1 479 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 PPFIBP1Q86W92 1011 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 TMEM161BQ8NDZ6 487 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 LARP4BQ92615 738 aaKnown RBP21.68■■□□□ 1.06
SMC4-222ENST00000490207 KLHL5Q96PQ7 755 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 USP28Q96RU2 1077 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 NTPCRQ9BSD7 190 aaKnown RBP21.68■■□□□ 1.06
SMC4-222ENST00000490207 C1QTNF1Q9BXJ1 281 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 S1PR5Q9H228 398 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 CXCL16Q9H2A7 254 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 PTPRHQ9HD43 1115 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 LARSQ9P2J5 1176 aaKnown RBP21.68■■□□□ 1.06
SMC4-222ENST00000490207 CACNG4Q9UBN1 327 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 ADAM28Q9UKQ2 775 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 SSX2IPQ9Y2D8 614 aa21.68■■□□□ 1.06
SMC4-222ENST00000490207 SRPRBQ9Y5M8 271 aaKnown RBP21.68■■□□□ 1.06
SMC4-222ENST00000490207 LILRB3O75022 631 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 MAPTP10636 758 aaKnown RBP21.67■■□□□ 1.06
SMC4-222ENST00000490207 GRM5P41594 1212 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 MPZL3Q6UWV2 235 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 TAS1R1Q7RTX1 841 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 ZBTB33Q86T24 672 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 CEP120Q8N960 986 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 SLC22A17Q8WUG5 538 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 RABGGTAQ92696 567 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 EPSTI1Q96J88 318 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 PAAF1Q9BRP4 392 aa21.67■■□□□ 1.06
SMC4-222ENST00000490207 CCDC94Q9BW85 323 aaPredicted RBP21.67■■□□□ 1.06
SMC4-222ENST00000490207 PHF7Q9BWX1 381 aaPredicted RBP21.67■■□□□ 1.06
SMC4-222ENST00000490207 PI4K2BG5E9Z4 385 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 H0YCG3 227 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 FAM13AO94988 1023 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 KRT18P05783 430 aaKnown RBP21.66■■□□□ 1.06
SMC4-222ENST00000490207 HSP90AA1P07900 732 aaKnown RBP21.66■■□□□ 1.06
SMC4-222ENST00000490207 CNPP09543 421 aaKnown RBP21.66■■□□□ 1.06
SMC4-222ENST00000490207 MCF2P10911 925 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 PROZP22891 400 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 KLRC2P26717 231 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 YARSP54577 528 aaKnown RBP21.66■■□□□ 1.06
SMC4-222ENST00000490207 NCKAP1LP55160 1127 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 DSG1Q02413 1049 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 CBX2Q14781 532 aaPredicted RBP21.66■■□□□ 1.06
SMC4-222ENST00000490207 NAB2Q15742 525 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 GLRA4Q5JXX5 417 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 USP49Q70CQ1 688 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 ANKFY1Q9P2R3 1169 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 CCDC39Q9UFE4 941 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 DENND4AQ7Z401 1863 aa21.66■■□□□ 1.06
SMC4-222ENST00000490207 SF3B1O75533 1304 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMC4-222ENST00000490207 ABLIM1O14639 778 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 TADA2AO75478 443 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 HARSP12081 509 aaKnown RBP21.65■■□□□ 1.06
SMC4-222ENST00000490207 TXLNAP40222 546 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 CLCN4P51793 760 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 OSTNP61366 133 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 USP41Q3LFD5 358 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 RARS2Q5T160 578 aaKnown RBP21.65■■□□□ 1.06
SMC4-222ENST00000490207 KIAA1841Q6NSI8 718 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 CES5AQ6NT32 575 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 HASPINQ8TF76 798 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 CLIC6Q96NY7 704 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 TCHPQ9BT92 498 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 GPR62Q9BZJ7 368 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 PARVGQ9HBI0 331 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 TOPORSQ9NS56 1045 aaPredicted RBP21.65■■□□□ 1.06
SMC4-222ENST00000490207 MORC2Q9Y6X9 1032 aaPredicted RBP21.65■■□□□ 1.06
SMC4-222ENST00000490207 VWA8A3KMH1 1905 aa21.65■■□□□ 1.06
SMC4-222ENST00000490207 SPDYE4A6NLX3 237 aa21.64■■□□□ 1.05
SMC4-222ENST00000490207 LOC730098B7Z3J9 87 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms