RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 LARGE1O95461 756 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 SRFP11831 508 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.4
PLOD3-216ENST00000489927 LAMP2P13473 410 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 FOSBP53539 338 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 CREMQ03060 361 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.4
PLOD3-216ENST00000489927 PRSS55Q6UWB4 352 aaPredicted RBP17.58■□□□□ 0.4
PLOD3-216ENST00000489927 GET4Q7L5D6 327 aaPredicted RBP17.58■□□□□ 0.4
PLOD3-216ENST00000489927 DIS3L2Q8IYB7 885 aaKnown RBP17.58■□□□□ 0.4
PLOD3-216ENST00000489927 GTF3C6Q969F1 213 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 NXPE3Q969Y0 559 aa17.58■□□□□ 0.4
PLOD3-216ENST00000489927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.4
PLOD3-216ENST00000489927 SF3B1O75533 1304 aaKnown RBP eCLIP17.57■□□□□ 0.4
PLOD3-216ENST00000489927 TTLL13PA6NNM8 815 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 ZMYND10O75800 440 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 SPATA31C1P0DKV0 1188 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 ANAPC15P60006 121 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 CDCA2Q69YH5 1023 aaPredicted RBP17.57■□□□□ 0.4
PLOD3-216ENST00000489927 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 ADSSL1Q8N142 457 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
PLOD3-216ENST00000489927 ST13P5Q8NFI4 369 aaPredicted RBP17.57■□□□□ 0.4
PLOD3-216ENST00000489927 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 PRIMPOLQ96LW4 560 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 FZD8Q9H461 694 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 PRMT7Q9NVM4 692 aaPredicted RBP17.57■□□□□ 0.4
PLOD3-216ENST00000489927 DCHS1Q96JQ0 3298 aa17.57■□□□□ 0.4
PLOD3-216ENST00000489927 CASTOR2A6NHX0 329 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 ANHXE9PGG2 379 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 PTGESO14684 152 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 JAK2O60674 1132 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 KIF4AO95239 1232 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 ATP2B1P20020 1258 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 RFX1P22670 979 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 TUSC3Q13454 348 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 HTR4Q13639 388 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 CATSPER3Q86XQ3 398 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 CLSTN3Q9BQT9 956 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 CXCL16Q9H2A7 254 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 TMEM60Q9H2L4 133 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 PDZD7Q9H5P4 517 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 TBC1D17Q9HA65 648 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 SNTG2Q9NY99 539 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 NUMBLQ9Y6R0 609 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 WDR87Q6ZQQ6 2873 aa17.56■□□□□ 0.4
PLOD3-216ENST00000489927 PTPRZ1P23471 2315 aaPredicted RBP17.55■□□□□ 0.4
PLOD3-216ENST00000489927 MED24O75448 989 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 FAM187BQ17R55 369 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 FAM171A1Q5VUB5 890 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 ZBTB8OSQ8IWT0 167 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 MCPH1Q8NEM0 835 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 LNX1Q8TBB1 728 aaPredicted RBP17.55■□□□□ 0.4
PLOD3-216ENST00000489927 BSNDQ8WZ55 320 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 TTPALQ9BTX7 342 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 TUFT1Q9NNX1 390 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 ARHGEF3Q9NR81 526 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 FBXW11Q9UKB1 542 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 USP20Q9Y2K6 914 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 SPTBN4Q9H254 2564 aa17.55■□□□□ 0.4
PLOD3-216ENST00000489927 RIF1Q5UIP0 2472 aaKnown RBP17.55■□□□□ 0.4
PLOD3-216ENST00000489927 N4BP3O15049 544 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 RECQL4O94761 1208 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 FSHRP23945 695 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 MCM7P33993 719 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 PRPF4BQ13523 1007 aaKnown RBP17.54■□□□□ 0.4
PLOD3-216ENST00000489927 TRIM29Q14134 588 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 NAB2Q15742 525 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 PSMD5Q16401 504 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 SPECC1Q5M775 1068 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 GRASPQ7Z6J2 395 aaPredicted RBP17.54■□□□□ 0.4
PLOD3-216ENST00000489927 CEP57Q86XR8 500 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 PIK3R5Q8WYR1 880 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 MTCL1Q9Y4B5 1905 aaKnown RBP17.54■□□□□ 0.4
PLOD3-216ENST00000489927 DOCK8Q8NF50 2099 aa17.54■□□□□ 0.4
PLOD3-216ENST00000489927 ADAM12O43184 909 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 EDN1P05305 212 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 THP07101 528 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 C8AP07357 584 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 DCNP07585 359 aaKnown RBP17.53■□□□□ 0.4
PLOD3-216ENST00000489927 NTHL1P78549 312 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 LIN9Q5TKA1 542 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 PHLDB3Q6NSJ2 640 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 FGF14Q92915 247 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 POLR3CQ9BUI4 534 aaPredicted RBP17.53■□□□□ 0.4
PLOD3-216ENST00000489927 RPP25Q9BUL9 199 aaKnown RBP17.53■□□□□ 0.4
PLOD3-216ENST00000489927 CCDC113Q9H0I3 377 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 C2orf40Q9H1Z8 148 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 SLC2A4RGQ9NR83 387 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 SIT1Q9Y3P8 196 aa17.53■□□□□ 0.4
PLOD3-216ENST00000489927 ZFP37Q9Y6Q3 630 aaPredicted RBP17.53■□□□□ 0.4
PLOD3-216ENST00000489927 PRKCBP05771 671 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
PLOD3-216ENST00000489927 LIG1P18858 919 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 FOXK2Q01167 660 aa17.52■□□□□ 0.4
PLOD3-216ENST00000489927 MAPK6Q16659 721 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms