RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PEX3P56589 373 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 POLR2FP61218 127 aaKnown RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 MYL7Q01449 175 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 EMC2Q15006 297 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 SLC18A3Q16572 532 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 QPCTQ16769 361 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ZNF484Q5JVG2 852 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ZNF569Q5MCW4 686 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 KRT39Q6A163 491 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 RAD9BQ6WBX8 426 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ZPBP2Q6X784 338 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 SEPT14Q6ZU15 432 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 TOGARAM2Q6ZUX3 1019 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ANO5Q75V66 913 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 CYFIP1Q7L576 1253 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 SYCE1Q8N0S2 351 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 C17orf53Q8N3J3 647 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 TMEM161BQ8NDZ6 487 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 TAF4BQ92750 862 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 GLG1Q92896 1179 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 BICD1Q96G01 975 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 FAXDC2Q96IV6 333 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 FBXL18Q96ME1 805 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 NOX5Q96PH1 765 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 FIZ1Q96SL8 496 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 PORCNQ9H237 461 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 FAM124BQ9H5Z6 455 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 DHX33Q9H6R0 707 aaKnown RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 LZTFL1Q9NQ48 299 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 PDLIM7Q9NR12 457 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 AGPAT5Q9NUQ2 364 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 GCNT4Q9P109 453 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 BTBD7Q9P203 1132 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ARHGAP28Q9P2N2 729 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 LCMT1Q9UIC8 334 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 CDC23Q9UJX2 597 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 ZNF215Q9UL58 517 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-208ENST00000489537 TRIM17Q9Y577 477 aa6.9□□□□□ -1.3
SF3A3-208ENST00000489537 COL1A2P08123 1366 aa6.9□□□□□ -1.31
SF3A3-208ENST00000489537 LOC285556D6RIA3 1793 aa6.9□□□□□ -1.31
SF3A3-208ENST00000489537 A0A0A6YYK5 440 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 CCL15-CCL14A0A0B4J2E2 113 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 DENND3A2RUS2 1198 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 SLC15A5A6NIM6 579 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 USP27XA6NNY8 438 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 SFI1A8K8P3 1242 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 RSPH10B2B2RC85 870 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 HNRNPDLO14979 420 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 ATP8B1O43520 1251 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 EXTL3O43909 919 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 COBLO75128 1261 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 MAFO75444 373 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 ERLIN1O75477 346 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GGPS1O95749 300 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GH1P01241 217 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 RSPH10BP0C881 870 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 TIMP2P16035 220 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 UBA1P22314 1058 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 PON1P27169 355 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 CNGA1P29973 690 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 MAGEA1P43355 309 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 MXI1P50539 228 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 CASP5P51878 434 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 NPEPPSP55786 919 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 ITIH3Q06033 890 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 SREBF2Q12772 1141 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 RAPGEF1Q13905 1077 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 CCL15Q16663 113 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 WDR44Q5JSH3 913 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 CELF3Q5SZQ8 465 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 UTP14CQ5TAP6 766 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 WDR78Q5VTH9 848 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 WDR59Q6PJI9 974 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 MAMDC4Q6UXC1 1216 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 DAW1Q8N136 415 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GPD1LQ8N335 351 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GPR161Q8N6U8 529 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 ATP8B4Q8TF62 1192 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 PSPC1Q8WXF1 523 aaKnown RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 POMGNT1Q8WZA1 660 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 RABGGTAQ92696 567 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GOLGA1Q92805 767 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 IRF7Q92985 503 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 NFKBIZQ9BYH8 718 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 IMPG2Q9BZV3 1241 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 DNAI2Q9GZS0 605 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 POLR3FQ9H1D9 316 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 GANQ9H2C0 597 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 TMEM8AQ9HCN3 771 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 ERAP1Q9NZ08 941 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 HSPBP1Q9NZL4 362 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 WRAP73Q9P2S5 460 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-208ENST00000489537 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
SF3A3-208ENST00000489537 APEX2Q9UBZ4 518 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms