RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 NSMFQ6X4W1 530 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 CEP68Q76N32 757 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 RIOX2Q8IUF8 465 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 ANKRD18AQ8IVF6 992 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 TEX2Q8IWB9 1127 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 ALG3Q92685 438 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 TMEM169Q96HH4 297 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 LOXL4Q96JB6 756 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 IPO9Q96P70 1041 aaKnown RBP5.58□□□□□ -1.52
CNN3-206ENST00000487539 PARK7Q99497 189 aaKnown RBP5.58□□□□□ -1.52
CNN3-206ENST00000487539 SPATA25Q9BR10 227 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 GPR27Q9NS67 375 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.58□□□□□ -1.52
CNN3-206ENST00000487539 FBLN5Q9UBX5 448 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 COA3Q9Y2R0 106 aaPredicted RBP5.58□□□□□ -1.52
CNN3-206ENST00000487539 PCDHA5Q9Y5H7 936 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 NPFFR2Q9Y5X5 522 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 X6R8D5 127 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 CHD9Q3L8U1 2897 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 ZFHX4Q86UP3 3567 aa5.58□□□□□ -1.52
CNN3-206ENST00000487539 PKD1L2Q7Z442 2459 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 ARAP2Q8WZ64 1704 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 ZFHX2Q9C0A1 2572 aaPredicted RBP5.57□□□□□ -1.52
CNN3-206ENST00000487539 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.57□□□□□ -1.52
CNN3-206ENST00000487539 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.57□□□□□ -1.52
CNN3-206ENST00000487539 NCAM1P13591 858 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 BCL6P41182 706 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 SLC6A11P48066 632 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 MMP14P50281 582 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 CC2D1BQ5T0F9 858 aaKnown RBP5.57□□□□□ -1.52
CNN3-206ENST00000487539 KRT40Q6A162 431 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 SH3RF3Q8TEJ3 882 aaPredicted RBP5.57□□□□□ -1.52
CNN3-206ENST00000487539 DCAF4Q8WV16 495 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 SEC14L1Q92503 715 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 COA7Q96BR5 231 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 CHAMP1Q96JM3 812 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 DEPDC7Q96QD5 511 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 ZFYVE21Q9BQ24 234 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 PCDHA2Q9Y5H9 948 aa5.57□□□□□ -1.52
CNN3-206ENST00000487539 BRWD1Q9NSI6 2320 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 EPG5Q9HCE0 2579 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 FZD7O75084 574 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 FPR2P25090 351 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 LONRF2Q1L5Z9 754 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 TRIM60Q495X7 471 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 ZC3H12BQ5HYM0 836 aaKnown RBP5.56□□□□□ -1.52
CNN3-206ENST00000487539 DENND5AQ6IQ26 1287 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 CRIP3Q6Q6R5 217 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 GADL1Q6ZQY3 521 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 USP51Q70EK9 711 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 SPATC1Q76KD6 591 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 C16orf59Q7L2K0 433 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 SCUBE1Q8IWY4 988 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 PLBD2Q8NHP8 589 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 OSBP2Q969R2 916 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 DRC1Q96MC2 740 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 CDC6Q99741 560 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 PCED1AQ9H1Q7 454 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 GREM2Q9H772 168 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 CLDND1Q9NY35 253 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 FAN1Q9Y2M0 1017 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 KNSTRNQ9Y448 316 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 HCFC2Q9Y5Z7 792 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 DCHS1Q96JQ0 3298 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 CHD7Q9P2D1 2997 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 LRRC37A2A6NM11 1700 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 RLFQ13129 1914 aa5.56□□□□□ -1.52
CNN3-206ENST00000487539 ARNTLO00327 626 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 ERC2O15083 957 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 HTATSF1O43719 755 aaKnown RBP5.55□□□□□ -1.52
CNN3-206ENST00000487539 TAF5LO75529 589 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 DGKIO75912 1065 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 LIMS1P48059 325 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 TREML2Q5T2D2 321 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
CNN3-206ENST00000487539 SLC39A5Q6ZMH5 540 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 PRSS33Q8NF86 280 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 CPA5Q8WXQ8 436 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
CNN3-206ENST00000487539 PHF20Q9BVI0 1012 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 EPB41L1Q9H4G0 881 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 RXFP1Q9HBX9 757 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 SNTG2Q9NY99 539 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 CHPF2Q9P2E5 772 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 ZNF112Q9UJU3 913 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 RALYQ9UKM9 306 aaKnown RBP5.55□□□□□ -1.52
CNN3-206ENST00000487539 FRMPD3Q5JV73 1810 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 CHD8Q9HCK8 2581 aa5.55□□□□□ -1.52
CNN3-206ENST00000487539 TPRP12270 2363 aaKnown RBP5.55□□□□□ -1.52
CNN3-206ENST00000487539 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
CNN3-206ENST00000487539 CXCL11O14625 94 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 PDE8AO60658 829 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 MAFKO60675 156 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 ASGR2P07307 311 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 LCP1P13796 627 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 MYOGP15173 224 aa5.54□□□□□ -1.52
CNN3-206ENST00000487539 IGFBP6P24592 240 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms