RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LONP1P36776 959 aaKnown RBP20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 TAS1R3Q7RTX0 852 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 SPIRE2Q8WWL2 714 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 CALML4Q96GE6 196 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 RPGRIP1Q96KN7 1286 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 MRPL4Q9BYD3 311 aaKnown RBP20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 PTPRHQ9HD43 1115 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 CHST7Q9NS84 486 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 ADAM28Q9UKQ2 775 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 GDAQ9Y2T3 454 aa20.24■□□□□ 0.83
PRPF40A-209ENST00000486100 C2CD2LO14523 706 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 TADA2AO75478 443 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 PLS3P13797 630 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 GLUD2P49448 558 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 CLCN4P51793 760 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 SMTNP53814 917 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 DSG1Q02413 1049 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 RAD51AP2Q09MP3 1159 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 HERC4Q5GLZ8 1057 aaPredicted RBP20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 KIAA1841Q6NSI8 718 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 FUT10Q6P4F1 479 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 GPR65Q8IYL9 337 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 C12orf76Q8N812 135 aaPredicted RBP20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 NECTIN4Q96NY8 510 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 GPR62Q9BZJ7 368 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 CXCL16Q9H2A7 254 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
PRPF40A-209ENST00000486100 FAM86C2PA6NEL3 165 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 SLC16A4O15374 487 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 MTHFRP42898 656 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 GRIN1Q05586 938 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 HSP90AA2PQ14568 343 aaPredicted RBP20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 NAB2Q15742 525 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 USP41Q3LFD5 358 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 ARSHQ5FYA8 562 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 RARS2Q5T160 578 aaKnown RBP20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 RABGGTAQ92696 567 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 FBXL18Q96ME1 805 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 TARS2Q9BW92 718 aaKnown RBP20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 MUTYHQ9UIF7 546 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 CLIC4Q9Y696 253 aa20.22■□□□□ 0.83
PRPF40A-209ENST00000486100 CASTOR2A6NHX0 329 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 K7ELQ4 463 aaPredicted RBP20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 TEX28O15482 410 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 ADH1AP07327 375 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 GRM5P41594 1212 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 RESTQ13127 1097 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 ATAT1Q5SQI0 421 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 TMEM161BQ8NDZ6 487 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 RIPOR3Q96MK2 946 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 PAAF1Q9BRP4 392 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 CDT1Q9H211 546 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 CACNG4Q9UBN1 327 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
PRPF40A-209ENST00000486100 NPHP3-ACAD11A0A0J9YXS1 232 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 PRR33A8MZF0 331 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 PROZP22891 400 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 STRN3Q13033 797 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 PTPAQ15257 358 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 KANK3Q6NY19 840 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 TCHPQ9BT92 498 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 POMKQ9H5K3 350 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 BLOC1S4Q9NUP1 217 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 C5orf42Q9H799 3197 aa20.2■□□□□ 0.82
PRPF40A-209ENST00000486100 BRD1O95696 1058 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 WEE2P0C1S8 567 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 MCF2P10911 925 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 YARSP54577 528 aaKnown RBP20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 KARSQ15046 597 aaKnown RBP20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 ZNF568Q3ZCX4 644 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 ALKAL1Q6UXT8 129 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 TMC5Q6UXY8 1006 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 ZBTB33Q86T24 672 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 CEP120Q8N960 986 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 B3GALT6Q96L58 329 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 PPP1R10Q96QC0 940 aaKnown RBP20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 SFXN1Q9H9B4 322 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 TOPORSQ9NS56 1045 aaPredicted RBP20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 FOXD4L1Q9NU39 408 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 FNIP2Q9P278 1114 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 DPP7Q9UHL4 492 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 ODF2LQ9ULJ1 636 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 NR2E1Q9Y466 385 aa20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 SF3B1O75533 1304 aaKnown RBP eCLIP20.19■□□□□ 0.82
PRPF40A-209ENST00000486100 SMIM28A0A1B0GU29 152 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 H0YCG3 227 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 ABLIM1O14639 778 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 TOM1L1O75674 476 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 KIF4AO95239 1232 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 C1RP00736 705 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 PLCG1P19174 1290 aa20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 CACNB1Q02641 598 aaPredicted RBP20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 DHX8Q14562 1220 aaKnown RBP20.18■□□□□ 0.82
PRPF40A-209ENST00000486100 XKR4Q5GH76 650 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms