RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NOLC1Q14978 699 aaKnown RBP eCLIP12.32□□□□□ -0.442e-39■■□□□ 11.4
SND1-212ENST00000485871 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
SND1-212ENST00000485871 ZNF568Q3ZCX4 644 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 VWA3BQ502W6 1294 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 UBXN11Q5T124 520 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 ZNF618Q5T7W0 954 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 CEP120Q8N960 986 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 RDH13Q8NBN7 331 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 CAGE1Q8TC20 777 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 TOX2Q96NM4 488 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 MSTO1Q9BUK6 570 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 VPS16Q9H269 839 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 AGO3Q9H9G7 860 aaKnown RBP12.32□□□□□ -0.44
SND1-212ENST00000485871 KIAA1586Q9HCI6 787 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 ARMCX3Q9UH62 379 aaPredicted RBP12.32□□□□□ -0.44
SND1-212ENST00000485871 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
SND1-212ENST00000485871 FRMD4BQ9Y2L6 1034 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
SND1-212ENST00000485871 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
SND1-212ENST00000485871 KCNJ6P48051 423 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 ACOT2P49753 483 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 DLG4P78352 724 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 CLDN10P78369 228 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 CYP24A1Q07973 514 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 FAAP100Q0VG06 881 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 LPIN1Q14693 890 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 TRIM60Q495X7 471 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
SND1-212ENST00000485871 CATSPER4Q7RTX7 472 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 ZBTB33Q86T24 672 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 BRSK2Q8IWQ3 736 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 PARD3BQ8TEW8 1205 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 PAWRQ96IZ0 340 aaKnown RBP12.31□□□□□ -0.44
SND1-212ENST00000485871 FAM213AQ9BRX8 229 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 NOC4LQ9BVI4 516 aaKnown RBP12.31□□□□□ -0.44
SND1-212ENST00000485871 NDST4Q9H3R1 872 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 C11orf49Q9H6J7 331 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
SND1-212ENST00000485871 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.31□□□□□ -0.44
SND1-212ENST00000485871 MICAL3Q7RTP6 2002 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 ZNF233A6NK53 670 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
SND1-212ENST00000485871 BMP8BP34820 402 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 VAMP7P51809 220 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
SND1-212ENST00000485871 POU5F1Q01860 360 aaKnown RBP12.3□□□□□ -0.44
SND1-212ENST00000485871 TLE2Q04725 743 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 DSC3Q14574 896 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 PSMD6Q15008 389 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 SEZ6Q53EL9 994 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 DPY19L2P1Q6NXN4 242 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 NOTUMQ6P988 496 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 CREBRFQ8IUR6 639 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 VSTM4Q8IW00 320 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.3□□□□□ -0.44
SND1-212ENST00000485871 TMEM192Q8IY95 271 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 ERGIC2Q96RQ1 377 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 TMX1Q9H3N1 280 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 MTMR10Q9NXD2 777 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 TBX21Q9UL17 535 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 ST3GAL5Q9UNP4 418 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 SIK3Q9Y2K2 1263 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 UMODL1Q5DID0 1318 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 ITIH6Q6UXX5 1313 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 LTBP2Q14767 1821 aa12.3□□□□□ -0.44
SND1-212ENST00000485871 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 PMM2O15305 246 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 MGEA5O60502 916 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 PQBP1O60828 265 aaKnown RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 TPM2P07951 284 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 TRIM49P0CI25 452 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 TRIM49CP0CI26 452 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 GHRP10912 638 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 HARSP12081 509 aaKnown RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 SELPP16109 830 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 GRM5P41594 1212 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 LRRC26Q2I0M4 334 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 CBWD6Q4V339 395 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms