RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 EEF2KMTQ96G04 330 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 RBSNQ9H1K0 784 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 ELAC1Q9H777 363 aaKnown RBP17.26■□□□□ 0.35
APOE-205ENST00000485628 FANCLQ9NW38 375 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 ANKFY1Q9P2R3 1169 aa17.26■□□□□ 0.35
APOE-205ENST00000485628 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 ABHD14A-ACY1A0A1B0GW23 586 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 TTC26A0AVF1 554 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 SMTNL1A8MU46 457 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 EOMESO95936 686 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 CLTAP09496 248 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 STAG3L1P0CL83 205 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 PSMC2P35998 433 aaKnown RBP17.25■□□□□ 0.35
APOE-205ENST00000485628 ACOT2P49753 483 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 CYP2J2P51589 502 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 WNT7BP56706 349 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 ENOX2Q16206 610 aaKnown RBP17.25■□□□□ 0.35
APOE-205ENST00000485628 SNRNP35Q16560 246 aaKnown RBP17.25■□□□□ 0.35
APOE-205ENST00000485628 SLC10A6Q3KNW5 377 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 C1orf220Q5T0J3 134 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
APOE-205ENST00000485628 AGMOQ6ZNB7 445 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 APBB1IPQ7Z5R6 666 aaPredicted RBP17.25■□□□□ 0.35
APOE-205ENST00000485628 FRMD5Q7Z6J6 570 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 DPF3Q92784 378 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 SAAL1Q96ER3 474 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 FAM213AQ9BRX8 229 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 TCHPQ9BT92 498 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 NXF3Q9H4D5 531 aaKnown RBP17.25■□□□□ 0.35
APOE-205ENST00000485628 RNF19AQ9NV58 838 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 PRKAG2Q9UGJ0 569 aa17.25■□□□□ 0.35
APOE-205ENST00000485628 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
APOE-205ENST00000485628 PTPRSQ13332 1948 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 GOLGA8IPA6NC78 632 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 GOLGA8JA6NMD2 632 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 EXOC3O60645 756 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 FGFR1OPO95684 399 aaKnown RBP17.24■□□□□ 0.35
APOE-205ENST00000485628 GNA14O95837 355 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 SKIP12755 728 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 SYN1P17600 705 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 FPGSQ05932 587 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 CYP24A1Q07973 514 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 IKBKEQ14164 716 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 SEZ6Q53EL9 994 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 TMEM240Q5SV17 173 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 BRSK2Q8IWQ3 736 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 THNSL1Q8IYQ7 743 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 GSTCDQ8NEC7 633 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 TMC2Q8TDI7 906 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 PARD3BQ8TEW8 1205 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 PLEKHA5Q9HAU0 1116 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 ZMYND8Q9ULU4 1186 aaPredicted RBP17.24■□□□□ 0.35
APOE-205ENST00000485628 HES2Q9Y543 173 aa17.24■□□□□ 0.35
APOE-205ENST00000485628 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 TNRC18O15417 2968 aaPredicted RBP17.23■□□□□ 0.35
APOE-205ENST00000485628 ZNF233A6NK53 670 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 MEIS3P2A8K0S8 358 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 BAIAP3O94812 1187 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 HSP90AA2PQ14568 343 aaPredicted RBP17.23■□□□□ 0.35
APOE-205ENST00000485628 PSMD6Q15008 389 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 ZBTB6Q15916 424 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 TRIM59Q8IWR1 403 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 ACAP3Q96P50 834 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 CXCL16Q9H2A7 254 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 TMEM161AQ9NX61 479 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 SNTG2Q9NY99 539 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 FRMD4BQ9Y2L6 1034 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
APOE-205ENST00000485628 FSD2A1L4K1 749 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 EFCAB14O75071 495 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 ACRP10323 421 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 TCP11X2Q5H9J9 407 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 CEP135Q66GS9 1140 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.22■□□□□ 0.355e-27■■■■■ 43.2
APOE-205ENST00000485628 ZNF365Q70YC5 407 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 FAM186BQ8IYM0 893 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 HERVK_113Q902F9 699 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 SNX27Q96L92 541 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 ASB7Q9H672 318 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 METTL14Q9HCE5 456 aaKnown RBP17.22■□□□□ 0.35
APOE-205ENST00000485628 CNTN3Q9P232 1028 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
APOE-205ENST00000485628 GIT1Q9Y2X7 761 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 CEP290O15078 2479 aa17.22■□□□□ 0.35
APOE-205ENST00000485628 RECQL4O94761 1208 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 CXCL8P10145 99 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 ATP1A3P13637 1013 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 KCNE1P15382 129 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 EEF1GP26641 437 aaKnown RBP17.21■□□□□ 0.35
APOE-205ENST00000485628 BFSP1Q12934 665 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 NAB2Q15742 525 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 MIIPQ5JXC2 388 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 INTS8Q75QN2 995 aaKnown RBP17.21■□□□□ 0.35
APOE-205ENST00000485628 CD302Q8IX05 232 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 RDH13Q8NBN7 331 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 TOP1MTQ969P6 601 aa17.21■□□□□ 0.35
APOE-205ENST00000485628 SLC35C1Q96A29 364 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms