RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 KIAA1683Q9H0B3 1180 aa12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 METTL14Q9HCE5 456 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 PAIP2BQ9ULR5 123 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-205ENST00000483956 GAKO14976 1311 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 A0A0J9YVX5 310 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 E2F6O75461 281 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 OCRLQ01968 901 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CCDC15Q0P6D6 951 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 RCN1Q15293 331 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 BMT2Q1RMZ1 405 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 LIN52Q52LA3 116 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 ZNF449Q6P9G9 518 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 GJA10Q969M2 543 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 MBOAT7Q96N66 472 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CYP3A7-CYP3A51PA0A087WV96 503 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 A6NJR5 290 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CALUO43852 315 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 LYNP07948 512 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CYP3A7P24462 503 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 PTENP60484 403 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 RNF43Q68DV7 783 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 RFWD3Q6PCD5 774 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 INTS8Q75QN2 995 aaKnown RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 DAAM2Q86T65 1068 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 KRT18P05783 430 aaKnown RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 HOXD13P35453 343 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CASP5P51878 434 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 GRAPQ13588 217 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 KBTBD12Q3ZCT8 623 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 OLIG1Q8TAK6 271 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 GRAPLQ8TC17 118 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 LZICQ8WZA0 190 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC7A6OSQ96CW6 309 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 TUBGCP5Q96RT8 1024 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 CIDEBQ9UHD4 219 aa12.35□□□□□ -0.43
SEC61A1-205ENST00000483956 TMEM120BA0PK00 339 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 GH1P01241 217 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 GABPAQ06546 454 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 CLUL1Q15846 466 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 SH2D4BQ5SQS7 431 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 MOXD1Q6UVY6 613 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 NCCRP1Q6ZVX7 275 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 KBTBD2Q8IY47 623 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 SLFN12Q8IYM2 578 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 LRRC47Q8N1G4 583 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC30A5Q8TAD4 765 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 SLC35C1Q96A29 364 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 DYDC2Q96IM9 177 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 PCDH18Q9HCL0 1135 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 25.3
SEC61A1-205ENST00000483956 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 ZBTB5O15062 677 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 MED24O75448 989 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 KRT36O76013 467 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 GIT2Q14161 759 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 RC3H1Q5TC82 1133 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 LRRC74BQ6ZQY2 392 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 CRAMP1Q96RY5 1269 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 GPCPD1Q9NPB8 672 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 TYW1Q9NV66 732 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 AJAP1Q9UKB5 411 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 DAAM1Q9Y4D1 1078 aa12.34□□□□□ -0.43
SEC61A1-205ENST00000483956 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 GREB1LQ9C091 1923 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 FOXO6A8MYZ6 492 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 KCNQ2O43526 872 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 ECE2O60344 883 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 AKAP3O75969 853 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 TTLL1O95922 423 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 IL1R1P14778 569 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 ALOX15P16050 662 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 RXRBP28702 533 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 NEK3P51956 506 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 PLTPP55058 493 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 AUHQ13825 339 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 GPATCH4Q5T3I0 446 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 SPATA24Q86W54 205 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 STKLD1Q8NE28 680 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 DTX3LQ8TDB6 740 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 WDR60Q8WVS4 1066 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 RFFLQ8WZ73 363 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 DNAJC1Q96KC8 554 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 TGS1Q96RS0 853 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 OXCT2Q9BYC2 517 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms