RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 UBXN1Q04323 297 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 SURF1Q15526 300 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.03
SMAD9-204ENST00000483941 KIZQ2M2Z5 673 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 RASIP1Q5U651 963 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 PSRC1Q6PGN9 363 aaPredicted RBP15.21■□□□□ 0.03
SMAD9-204ENST00000483941 MPZL3Q6UWV2 235 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 RUFY4Q6ZNE9 571 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 CCDC51Q96ER9 411 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 PDLIM2Q96JY6 352 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 FBXL18Q96ME1 805 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 TARS2Q9BW92 718 aaKnown RBP15.21■□□□□ 0.03
SMAD9-204ENST00000483941 CELF4Q9BZC1 486 aaKnown RBP15.21■□□□□ 0.03
SMAD9-204ENST00000483941 VPS16Q9H269 839 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 NDST4Q9H3R1 872 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 TAB2Q9NYJ8 693 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMAD9-204ENST00000483941 TRPV2Q9Y5S1 764 aa15.21■□□□□ 0.03
SMAD9-204ENST00000483941 ANKRD63C9JTQ0 380 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 PTMAP06454 111 aaKnown RBP15.2■□□□□ 0.02
SMAD9-204ENST00000483941 MCF2P10911 925 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 IGFBP4P22692 258 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 ADSSP30520 456 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
SMAD9-204ENST00000483941 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
SMAD9-204ENST00000483941 MCL1Q07820 350 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 TRIM14Q14142 442 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 ADGRE1Q14246 886 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 RAB30Q15771 203 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
SMAD9-204ENST00000483941 CATSPER4Q7RTX7 472 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 APTXQ7Z2E3 356 aaKnown RBP15.2■□□□□ 0.02
SMAD9-204ENST00000483941 ZBTB10Q96DT7 871 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 NUP58Q9BVL2 599 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 PCIF1Q9H4Z3 704 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 SQORQ9Y6N5 450 aa15.2■□□□□ 0.02
SMAD9-204ENST00000483941 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 ITIH6Q6UXX5 1313 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 GPR182O15218 404 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 OGTO15294 1046 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 P4HA2O15460 535 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
SMAD9-204ENST00000483941 CSF2RAP15509 400 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 GTF2H1P32780 548 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 AP3M2P53677 418 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 GSDMDP57764 484 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 BFSP1Q12934 665 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 BFSP2Q13515 415 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 HIC1Q14526 733 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 NOLC1Q14978 699 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMAD9-204ENST00000483941 DCAF4L1Q3SXM0 396 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 TCERG1LQ5VWI1 586 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 SPECC1LQ69YQ0 1117 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 NOTUMQ6P988 496 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 C16orf59Q7L2K0 433 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 VSTM4Q8IW00 320 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 TMEM199Q8N511 208 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 CAGE1Q8TC20 777 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 NAP1L5Q96NT1 182 aaPredicted RBP15.19■□□□□ 0.02
SMAD9-204ENST00000483941 OSMRQ99650 979 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 C1QTNF1Q9BXJ1 281 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 MSRAQ9UJ68 235 aa15.19■□□□□ 0.02
SMAD9-204ENST00000483941 A0A1B0GUA9 196 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 GTPBP10A4D1E9 387 aaKnown RBP15.18■□□□□ 0.02
SMAD9-204ENST00000483941 AP5Z1O43299 807 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 NRDCO43847 1150 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 PROZP22891 400 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-204ENST00000483941 THPOP40225 353 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 VAMP7P51809 220 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 MCCD1P59942 119 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-204ENST00000483941 TMEM62Q0P6H9 643 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 ZNF568Q3ZCX4 644 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 DCAF17Q5H9S7 520 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-204ENST00000483941 SLC39A4Q6P5W5 647 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 PPFIBP1Q86W92 1011 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 TRIM44Q96DX7 344 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-204ENST00000483941 BORCS6Q96GS4 357 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 MFSD14AQ96MC6 490 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 FNBP1Q96RU3 617 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 FAM213AQ9BRX8 229 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 PPP1R12CQ9BZL4 782 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
SMAD9-204ENST00000483941 PTPRHQ9HD43 1115 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 CHST12Q9NRB3 414 aa15.18■□□□□ 0.02
SMAD9-204ENST00000483941 PMM2O15305 246 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 TSPAN1O60635 241 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 ACRP10323 421 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 CASP4P49662 377 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 CDK7P50613 346 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 KCNH2Q12809 1159 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 FAM26DQ5JW98 314 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 MIIPQ5JXC2 388 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms