RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 DDX53Q86TM3 631 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 CEP57L1Q8IYX8 460 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 TMEM87AQ8NBN3 555 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 MICAL1Q8TDZ2 1067 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 DDX12PQ92771 950 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 PABPC5Q96DU9 382 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 IGSF21Q96ID5 467 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 UROC1Q96N76 676 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 GAD1Q99259 594 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 KIFC3Q9BVG8 833 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 COLEC11Q9BWP8 271 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 NXF3Q9H4D5 531 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 ZHX3Q9H4I2 956 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 NRDE2Q9H7Z3 1164 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 PLEKHA5Q9HAU0 1116 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 ALG13Q9NP73 1137 aaKnown RBP8.69□□□□□ -1.02
DDX39B-218ENST00000478365 ENTPD7Q9NQZ7 604 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 PCDHB13Q9Y5F0 798 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 IRAK3Q9Y616 596 aa8.69□□□□□ -1.02
DDX39B-218ENST00000478365 BDP1A6H8Y1 2624 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TCHHQ07283 1943 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 A0A1W2PQ27 194 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 A0A1W2PQ64 194 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 A0A1W2PQD8 194 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 FSCN2O14926 492 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 KIAA0391O15091 583 aaKnown RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 RECQL4O94761 1208 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 C1RP00736 705 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 THP07101 528 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 GALTP07902 379 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 CLTAP09496 248 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 CMA1P23946 247 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 MATR3P43243 847 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 GTF2BQ00403 316 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 MCL1Q07820 350 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 DSC1Q08554 894 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 RAD51AP2Q09MP3 1159 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TUSC3Q13454 348 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 CCDC85BQ15834 202 aaPredicted RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TCEAL5Q5H9L2 206 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TJAP1Q5JTD0 557 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 AXDND1Q5T1B0 1012 aaPredicted RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 USP49Q70CQ1 688 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TMC7Q7Z402 723 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 SPRED2Q7Z698 418 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 PPFIBP1Q86W92 1011 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 CD302Q8IX05 232 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 COLGALT2Q8IYK4 626 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 EFHBQ8N7U6 833 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 PDILTQ8N807 584 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 PPM1EQ8WY54 764 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 CCDC47Q96A33 483 aaKnown RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 DDX27Q96GQ7 796 aaKnown RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 ACAP3Q96P50 834 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TARS2Q9BW92 718 aaKnown RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 APOL6Q9BWW8 343 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 CDT1Q9H211 546 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TMEM206Q9H813 350 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 UBE2ZQ9H832 354 aaPredicted RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 MRPL44Q9H9J2 332 aaKnown RBP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 PTPRHQ9HD43 1115 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 KBTBD4Q9NVX7 518 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 DPP7Q9UHL4 492 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 TBX20Q9UMR3 447 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 PCDHA7Q9UN72 937 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 SF3B1O75533 1304 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX39B-218ENST00000478365 PLXNA4Q9HCM2 1894 aa8.68□□□□□ -1.02
DDX39B-218ENST00000478365 FRMD3A2A2Y4 597 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 GOLGA6L3A6NEY3 463 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 TMEM189-UBE2V1I3L0A0 370 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 EIF3DO15371 548 aaKnown RBP eCLIP8.67□□□□□ -1.02
DDX39B-218ENST00000478365 TRAPPC3O43617 180 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 UBE4BO95155 1302 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 KIF20AO95235 890 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 URODP06132 367 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 SLFN14P0C7P3 912 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 CTSAP10619 480 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 IDEP14735 1019 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 KCNE1P15382 129 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 OR1G1P47890 313 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 SLC11A1P49279 550 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 SCNN1GP51170 649 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 SNRPFP62306 86 aaKnown RBP8.67□□□□□ -1.02
DDX39B-218ENST00000478365 ASIC1P78348 528 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 PKP1Q13835 747 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 E2F4Q16254 413 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 HERC4Q5GLZ8 1057 aaPredicted RBP8.67□□□□□ -1.02
DDX39B-218ENST00000478365 EEF1DP3Q658K8 133 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 SHC4Q6S5L8 630 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 TAS1R3Q7RTX0 852 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 ZNF720Q7Z2F6 126 aa8.67□□□□□ -1.02
DDX39B-218ENST00000478365 DHX58Q96C10 678 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms