RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 BMP1P13497 986 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 POLR2EP19388 210 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ATP5DP30049 168 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 CCND2P30279 289 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 PEX5P50542 639 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 SNX16P57768 344 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 MRPS9P82933 396 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 LMNB2Q03252 620 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ITIH3Q06033 890 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 DMPKQ09013 629 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 GRB10Q13322 594 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 STIM1Q13586 685 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 SKIV2LQ15477 1246 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 CEP85LQ5SZL2 805 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 IRGCQ6NXR0 463 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ZCCHC8Q6NZY4 707 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 NANOGNBQ7Z5D8 188 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 RALYLQ86SE5 291 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 SERINC5Q86VE9 423 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 FCHSD1Q86WN1 690 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 MB21D2Q8IYB1 491 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 CARNMT1Q8N4J0 409 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 RNF10Q8N5U6 811 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ZBTB8BQ8NAP8 495 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 SPC24Q8NBT2 197 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 TNIP2Q8NFZ5 429 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 NEK11Q8NG66 645 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 GDPD5Q8WTR4 605 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ZNF75CPQ92670 426 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 INPP4AQ96PE3 977 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 CGREF1Q99674 301 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 MTRQ99707 1265 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 JPH2Q9BR39 696 aaPredicted RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 UQCC2Q9BRT2 126 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 MYL10Q9BUA6 226 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 OSBPL7Q9BZF2 842 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 NSRP1Q9H0G5 558 aaKnown RBP6.4□□□□□ -1.38
TRA2B-211ENST00000477939 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 TPCN1Q9ULQ1 816 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 ZNF510Q9Y2H8 683 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 TELO2Q9Y4R8 837 aa6.4□□□□□ -1.38
TRA2B-211ENST00000477939 NLRC5Q86WI3 1866 aa6.4□□□□□ -1.39
TRA2B-211ENST00000477939 IQANK1A0A1B0GTG1 560 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 ABHD14A-ACY1A0A1B0GW23 586 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LINC01553A4QN01 128 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 A6NNZ2 444 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 KIF28PB7ZC32 967 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 H3BRB1 525 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TSPAN1O60635 241 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LGR5O75473 907 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 DNAJC8O75937 253 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LUC7L3O95232 432 aaKnown RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LGALS2P05162 132 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 SMIM10L2AP0DMW4 78 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 SMIM10L2BP0DMW5 78 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 S100A1P23297 94 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 GBP2P32456 591 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 ICAM3P32942 547 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 IFFO1Q0D2I5 559 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 KIF5AQ12840 1032 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 PLCB4Q15147 1175 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TUBB8Q3ZCM7 444 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 CCDC153Q494R4 210 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 CAPRIN2Q6IMN6 1127 aaKnown RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TMCO3Q6UWJ1 677 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 RAB11FIP4Q86YS3 637 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 CCAR2Q8N163 923 aaKnown RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LRRC43Q8N309 656 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 NCOA7Q8NI08 942 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 IGDCC4Q8TDY8 1250 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 DYDC1Q8WWB3 177 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 RUFY2Q8WXA3 655 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TSC1Q92574 1164 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 SPDL1Q96EA4 605 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 DDX27Q96GQ7 796 aaKnown RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 FAM167BQ9BTA0 163 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TRIM5Q9C035 493 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 ABCG4Q9H172 646 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 CENPHQ9H3R5 247 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TUT1Q9H6E5 874 aaKnown RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 SUGCTQ9HAC7 445 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 LY9Q9HBG7 655 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 AVENQ9NQS1 362 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 FKBP14Q9NWM8 211 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 AIPL1Q9NZN9 384 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 DSEQ9UL01 958 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 CORO1CQ9ULV4 474 aaPredicted RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 RBM8AQ9Y5S9 174 aaKnown RBP6.39□□□□□ -1.39
TRA2B-211ENST00000477939 TRIOO75962 3097 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 MYO7AQ13402 2215 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 RALGAPA2Q2PPJ7 1873 aa6.39□□□□□ -1.39
TRA2B-211ENST00000477939 KAT6AQ92794 2004 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 C17orf102A2RUQ5 167 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 RSPH10B2B2RC85 870 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 SPATA31C2B4DYI2 1134 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 NOP56O00567 594 aaKnown RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 MEIS2O14770 477 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms