RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 RAP1GAPP47736 663 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 GNAQP50148 359 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 DNM2P50570 870 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 PRKCEQ02156 737 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 PTGDRQ13258 359 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 CACNA2D4Q7Z3S7 1137 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 RALYLQ86SE5 291 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 PDZD3Q86UT5 571 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 KBTBD6Q86V97 674 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 ZNF410Q86VK4 478 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 WDR5BQ86VZ2 330 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 KSR1Q8IVT5 923 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 GPR65Q8IYL9 337 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 SLC7A14Q8TBB6 771 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 IRF7Q92985 503 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 NLRP4Q96MN2 994 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 TRMT61BQ9BVS5 477 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 UBN1Q9NPG3 1134 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 VPS45Q9NRW7 570 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 RBM12Q9NTZ6 932 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 TBC1D22BQ9NU19 505 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 C2orf42Q9NWW7 574 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 GDE1Q9NZC3 331 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 ANKFY1Q9P2R3 1169 aa10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 HELZ2Q9BYK8 2649 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-206ENST00000477836 TICRRQ7Z2Z1 1910 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 ARL5CA6NH57 179 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 EIF4E1BA6NMX2 242 aaKnown RBP10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 ITGA4P13612 1032 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 GDI1P31150 447 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 HSPA4P34932 840 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 MLH1P40692 756 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 SCNN1GP51170 649 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 PTH1RQ03431 593 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 DSC1Q08554 894 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 LRRC32Q14392 662 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 SLC5A9Q2M3M2 681 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 MTERF2Q49AM1 385 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 RTP2Q5QGT7 225 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 UBXN11Q5T124 520 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 AXDND1Q5T1B0 1012 aaPredicted RBP10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 RNF20Q5VTR2 975 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 DAB2IPQ5VWQ8 1189 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 POTEHQ6S545 545 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 Q6ZS52 159 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 IGDCC4Q8TDY8 1250 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 RABGGTAQ92696 567 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 ZFP42Q96MM3 310 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 GAD1Q99259 594 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 CLSTN3Q9BQT9 956 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 ZNF334Q9HCZ1 680 aaPredicted RBP10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 MIOSQ9NXC5 875 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 SUCLA2Q9P2R7 463 aaPredicted RBP10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 ADAM28Q9UKQ2 775 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 F5P12259 2224 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 COL4A2P08572 1712 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 WDR81Q562E7 1941 aa10.86□□□□□ -0.67
SMARCB1-206ENST00000477836 HYAL3O43820 417 aaPredicted RBP10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 TADA2AO75478 443 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 RPP40O75818 363 aaKnown RBP10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 RHOP08100 348 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 CEACAM1P13688 526 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 CEBPBP17676 345 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 RXRAP19793 462 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 FCARP24071 287 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 PXNP49023 591 aaPredicted RBP10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 NAPAP54920 295 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 ANAPC15P60006 121 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 UGCGQ16739 394 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 MAP4K3Q8IVH8 894 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 SMG8Q8ND04 991 aaKnown RBP10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 NCOA7Q8NI08 942 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 GAB3Q8WWW8 586 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 SH2D3AQ9BRG2 576 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 ZFP14Q9HCL3 533 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 RIC8AQ9NPQ8 531 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 SEPT9Q9UHD8 586 aaPredicted RBP10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 NEUROG3Q9Y4Z2 214 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 PCDHGA5Q9Y5G8 931 aa10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 TDRD15B5MCY1 1934 aaKnown RBP10.85□□□□□ -0.67
SMARCB1-206ENST00000477836 TMEM150BA6NC51 233 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 WDR64B1ANS9 1081 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 CYP21A2P08686 494 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 POU2F2P09086 479 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 ADCY7P51828 1080 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 ANTXR2P58335 489 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 TARBP2Q15633 366 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 PSMD5Q16401 504 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 COL28A1Q2UY09 1125 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 WWC2Q6AWC2 1192 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 TYW1BQ6NUM6 668 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms